Agroscope Changins-Wädenswil ACW, Plant Protection Division, Wädenswil, Switzerland.
Appl Environ Microbiol. 2012 Jun;78(12):4412-9. doi: 10.1128/AEM.07351-11. Epub 2012 Apr 13.
Pantoea vagans C9-1 is a biocontrol strain that produces at least two antibiotics inhibiting the growth of Erwinia amylovora, the causal agent of fire blight disease of pear and apple. One antibiotic, herbicolin I, was purified from culture filtrates of P. vagans C9-1 and determined to be 2-amino-3-(oxirane-2,3-dicarboxamido)-propanoyl-valine, also known as N(ß)-epoxysuccinamoyl-DAP-valine. A plasposon library was screened for mutants that had lost the ability to produce herbicolin I. It was shown that mutants had reduced biocontrol efficacy in immature pear assays. The biosynthetic gene cluster in P. vagans C9-1 was identified by sequencing the flanking regions of the plasposon insertion sites. The herbicolin I biosynthetic gene cluster consists of 10 coding sequences (CDS) and is located on the 166-kb plasmid pPag2. Sequence comparisons identified orthologous gene clusters in Pantoea agglomerans CU0119 and Serratia proteamaculans 568. A low incidence of detection of the biosynthetic cluster in a collection of 45 Pantoea spp. from biocontrol, environmental, and clinical origins showed that this is a rare trait among the tested strains.
膨胀泛菌 C9-1 是一种生防菌株,它能产生至少两种抗生素,抑制梨火疫病菌(Erwinia amylovora)的生长,梨火疫病菌是梨和苹果火疫病的病原体。其中一种抗生素,除草霉素 I,从膨胀泛菌 C9-1 的培养液中被分离出来,并确定为 2-氨基-3-(环氧乙烷-2,3-二羧酰胺基)-丙酰缬氨酸,也称为 N(β)-环氧琥珀酰-DAP-缬氨酸。通过筛选转座子文库获得丧失产生除草霉素 I 能力的突变体。结果表明,突变体在未成熟的梨试验中生物防治效果降低。通过测序转座子插入位点的侧翼区域,鉴定了膨胀泛菌 C9-1 中的生物合成基因簇。除草霉素 I 生物合成基因簇由 10 个编码序列(CDS)组成,位于 166kb 的质粒 pPag2 上。序列比较鉴定了泛菌属 CU0119 和粘质沙雷氏菌 568 中的同源基因簇。在从生防、环境和临床来源的 45 种泛菌属样本中,生物合成簇的检测率很低,这表明在测试的菌株中,这是一种罕见的特征。