Suppr超能文献

鉴定植物内生细菌 C9-1 合成抗菌肽 herbicolin 的生物合成操纵子及其在泛菌属中的分布

Characterization of the biosynthetic operon for the antibacterial peptide herbicolin in Pantoea vagans biocontrol strain C9-1 and incidence in Pantoea species.

机构信息

Agroscope Changins-Wädenswil ACW, Plant Protection Division, Wädenswil, Switzerland.

出版信息

Appl Environ Microbiol. 2012 Jun;78(12):4412-9. doi: 10.1128/AEM.07351-11. Epub 2012 Apr 13.

Abstract

Pantoea vagans C9-1 is a biocontrol strain that produces at least two antibiotics inhibiting the growth of Erwinia amylovora, the causal agent of fire blight disease of pear and apple. One antibiotic, herbicolin I, was purified from culture filtrates of P. vagans C9-1 and determined to be 2-amino-3-(oxirane-2,3-dicarboxamido)-propanoyl-valine, also known as N(ß)-epoxysuccinamoyl-DAP-valine. A plasposon library was screened for mutants that had lost the ability to produce herbicolin I. It was shown that mutants had reduced biocontrol efficacy in immature pear assays. The biosynthetic gene cluster in P. vagans C9-1 was identified by sequencing the flanking regions of the plasposon insertion sites. The herbicolin I biosynthetic gene cluster consists of 10 coding sequences (CDS) and is located on the 166-kb plasmid pPag2. Sequence comparisons identified orthologous gene clusters in Pantoea agglomerans CU0119 and Serratia proteamaculans 568. A low incidence of detection of the biosynthetic cluster in a collection of 45 Pantoea spp. from biocontrol, environmental, and clinical origins showed that this is a rare trait among the tested strains.

摘要

膨胀泛菌 C9-1 是一种生防菌株,它能产生至少两种抗生素,抑制梨火疫病菌(Erwinia amylovora)的生长,梨火疫病菌是梨和苹果火疫病的病原体。其中一种抗生素,除草霉素 I,从膨胀泛菌 C9-1 的培养液中被分离出来,并确定为 2-氨基-3-(环氧乙烷-2,3-二羧酰胺基)-丙酰缬氨酸,也称为 N(β)-环氧琥珀酰-DAP-缬氨酸。通过筛选转座子文库获得丧失产生除草霉素 I 能力的突变体。结果表明,突变体在未成熟的梨试验中生物防治效果降低。通过测序转座子插入位点的侧翼区域,鉴定了膨胀泛菌 C9-1 中的生物合成基因簇。除草霉素 I 生物合成基因簇由 10 个编码序列(CDS)组成,位于 166kb 的质粒 pPag2 上。序列比较鉴定了泛菌属 CU0119 和粘质沙雷氏菌 568 中的同源基因簇。在从生防、环境和临床来源的 45 种泛菌属样本中,生物合成簇的检测率很低,这表明在测试的菌株中,这是一种罕见的特征。

相似文献

2
Contribution of Native Plasmids of C9-1 to Epiphytic Fitness and Fire Blight Management on Apple and Pear Flowers and Fruits.
Phytopathology. 2023 Dec;113(12):2187-2196. doi: 10.1094/PHYTO-04-23-0144-SA. Epub 2023 Dec 13.
3
Genome sequence of the biocontrol agent Pantoea vagans strain C9-1.
J Bacteriol. 2010 Dec;192(24):6486-7. doi: 10.1128/JB.01122-10. Epub 2010 Oct 15.
4
2-amino-3-(oxirane-2,3-dicarboxamido)-propanoyl-valine, an effective peptide antibiotic from the epiphyte Pantoea agglomerans 48b/90.
Appl Environ Microbiol. 2009 Dec;75(24):7710-7. doi: 10.1128/AEM.01244-09. Epub 2009 Oct 9.
7
Identification of a Pantoea biosynthetic cluster that directs the synthesis of an antimicrobial natural product.
PLoS One. 2014 May 5;9(5):e96208. doi: 10.1371/journal.pone.0096208. eCollection 2014.
8
Pantocin A, a peptide-derived antibiotic involved in biological control by plant-associated Pantoea species.
Arch Microbiol. 2019 Aug;201(6):713-722. doi: 10.1007/s00203-019-01647-7. Epub 2019 Mar 13.
9
Dapdiamides, tripeptide antibiotics formed by unconventional amide ligases.
J Nat Prod. 2010 Mar 26;73(3):441-6. doi: 10.1021/np900685z.

引用本文的文献

1
Biological control of Aspergillus flavus in peanut and maize kernel using Pantoea vagans BWL1.
Antonie Van Leeuwenhoek. 2025 Aug 29;118(10):144. doi: 10.1007/s10482-025-02154-0.
4
Distribution and comparative genomic analysis of antimicrobial gene clusters found in .
Front Microbiol. 2024 Aug 14;15:1416674. doi: 10.3389/fmicb.2024.1416674. eCollection 2024.
6
Genomic delineation and description of species and within-species lineages in the genus .
Front Microbiol. 2023 Nov 9;14:1254999. doi: 10.3389/fmicb.2023.1254999. eCollection 2023.
7
Insights into the Potential Role of Plasmids in the Versatility of the Genus Pantoea.
Mol Biotechnol. 2024 Dec;66(12):3398-3414. doi: 10.1007/s12033-023-00960-3. Epub 2023 Nov 26.
8
Three Phages One Host: Isolation and Characterization of Phages from a Grasshopper Specimen.
Int J Mol Sci. 2023 Jan 17;24(3):1820. doi: 10.3390/ijms24031820.
10
Bacterial Siderophores: Classification, Biosynthesis, Perspectives of Use in Agriculture.
Plants (Basel). 2022 Nov 12;11(22):3065. doi: 10.3390/plants11223065.

本文引用的文献

1
Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea.
Int J Syst Evol Microbiol. 2012 Aug;62(Pt 8):1736-1743. doi: 10.1099/ijs.0.032375-0. Epub 2011 Sep 19.
8
Genomic and phenotypic characterization of a nonpigmented variant of Pantoea vagans biocontrol strain C9-1 lacking the 530-kb megaplasmid pPag3.
FEMS Microbiol Lett. 2010 Jul 1;308(1):48-54. doi: 10.1111/j.1574-6968.2010.01994.x. Epub 2010 Apr 20.
10
Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp.
Mol Plant Microbe Interact. 2010 Apr;23(4):384-93. doi: 10.1094/MPMI-23-4-0384.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验