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三噬菌体一宿主:从一只蚱蜢标本中分离和鉴定噬菌体

Three Phages One Host: Isolation and Characterization of Phages from a Grasshopper Specimen.

作者信息

Zrelovs Nikita, Jansons Juris, Kazaka Tatjana, Kazaks Andris, Dislers Andris

机构信息

Latvian Biomedical Research and Study Centre, Ratsupites 1 k-1, LV-1067 Riga, Latvia.

出版信息

Int J Mol Sci. 2023 Jan 17;24(3):1820. doi: 10.3390/ijms24031820.

Abstract

The bacterial genus comprises species found in a variety of different environmental sources. spp. are often recovered from plant material and are capable of both benefitting the plants and acting like phytopathogens. Some species of (including ) are considered opportunistic human pathogens capable of causing various infections in immunocompromised subjects. In this study, a strain of (identified by 16S rRNA gene sequencing) was isolated from a dead specimen of an unidentified Latvian grasshopper species. The retrieved strain of was then used as a host for the potential retrieval of phages from the same source material. After rounds of plaque purification and propagation, three high-titer lysates corresponding to putatively distinct phages were acquired. Transmission electron microscopy revealed that one of the phages was a myophage with an unusual morphology, while the two others were typical podophages. Whole-genome sequencing (WGS) was performed for each of these isolated phages. Genome de novo assembly and subsequent functional annotation confirmed that three different strictly lytic phages were isolated. Elaborate genomic characterization of the acquired phages was performed to elucidate their place within the so-far-uncovered phage diversity.

摘要

该细菌属包含在多种不同环境来源中发现的物种。[细菌名称]物种通常从植物材料中分离出来,既能使植物受益,又能表现得像植物病原体。[细菌名称]的一些物种(包括[具体物种])被认为是机会性人类病原体,能够在免疫功能低下的个体中引起各种感染。在本研究中,从一只身份不明的拉脱维亚蚱蜢物种的死亡标本中分离出一株[细菌名称](通过16S rRNA基因测序鉴定)。然后,将分离得到的[细菌名称]菌株用作从相同源材料中潜在检索噬菌体的宿主。经过多轮噬菌斑纯化和增殖,获得了三种对应于假定不同噬菌体的高滴度裂解物。透射电子显微镜显示,其中一种噬菌体是具有不寻常形态的肌尾噬菌体,而另外两种是典型的短尾噬菌体。对这些分离出的噬菌体分别进行了全基因组测序(WGS)。基因组从头组装和随后的功能注释证实分离出了三种不同的严格裂解噬菌体。对获得的噬菌体进行了详细的基因组特征分析,以阐明它们在迄今未发现的噬菌体多样性中的位置。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60a1/9915841/5b6dd6014fac/ijms-24-01820-g001.jpg

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