Applied Microbiology Laboratory, Graduate School of Bioresources, Mie University, Tsu, Japan.
Appl Environ Microbiol. 2012 Jul;78(14):4781-7. doi: 10.1128/AEM.07457-11. Epub 2012 May 4.
In general, cellulases and hemicellulases are modular enzymes in which the catalytic domain is appended to one or more noncatalytic carbohydrate binding modules (CBMs). CBMs, by concentrating the parental enzyme at their target polysaccharide, increase the capacity of the catalytic module to bind the substrate, leading to a potentiation in catalysis. Clostridium thermocellum hypothetical protein Cthe_0821, defined here as C. thermocellum Man5A, is a modular protein comprising an N-terminal signal peptide, a family 5 glycoside hydrolase (GH5) catalytic module, a family 32 CBM (CBM32), and a C-terminal type I dockerin module. Recent proteomic studies revealed that Cthe_0821 is one of the major cellulosomal enzymes when C. thermocellum is cultured on cellulose. Here we show that the GH5 catalytic module of Cthe_0821 displays endomannanase activity. C. thermocellum Man5A hydrolyzes soluble konjac glucomannan, soluble carob galactomannan, and insoluble ivory nut mannan but does not attack the highly galactosylated mannan from guar gum, suggesting that the enzyme prefers unsubstituted β-1,4-mannoside linkages. The CBM32 of C. thermocellum Man5A displays a preference for the nonreducing ends of mannooligosaccharides, although the protein module exhibits measurable affinity for the termini of β-1,4-linked glucooligosaccharides such as cellobiose. CBM32 potentiates the activity of C. thermocellum Man5A against insoluble mannans but has no significant effect on the capacity of the enzyme to hydrolyze soluble galactomannans and glucomannans. The product profile of C. thermocellum Man5A is affected by the presence of CBM32.
一般来说,纤维素酶和半纤维素酶是模块化酶,其中催化结构域附加到一个或多个非催化碳水化合物结合模块(CBM)上。CBM 通过将亲本酶浓缩在其靶多糖上,增加了催化模块与底物结合的能力,从而增强了催化作用。这里定义的热纤梭菌假定蛋白 Cthe_0821 是一种模块化蛋白,包含一个 N 端信号肽、一个家族 5 糖苷水解酶(GH5)催化模块、一个家族 32 CBM(CBM32)和一个 C 端类型 I 衔接子模块。最近的蛋白质组学研究表明,当热纤梭菌在纤维素上培养时,Cthe_0821 是主要的细胞外酶之一。在这里,我们证明 Cthe_0821 的 GH5 催化模块具有内切甘露聚糖酶活性。C. thermocellum Man5A 水解可溶性魔芋甘露聚糖、可溶性角豆半乳甘露聚糖和不溶性象牙坚果甘露聚糖,但不攻击瓜尔胶中高度半乳糖化的甘露聚糖,表明该酶更喜欢未取代的β-1,4-甘露糖苷键。C. thermocellum Man5A 的 CBM32 对甘露寡糖的非还原端表现出偏好,尽管该蛋白模块对β-1,4 连接的葡寡糖如纤维二糖的末端表现出可测量的亲和力。CBM32 增强了 C. thermocellum Man5A 对不溶性甘露聚糖的活性,但对酶水解可溶性半乳甘露聚糖和甘露聚糖的能力没有显著影响。CBM32 的存在影响了 C. thermocellum Man5A 的产物谱。