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银莲花(毛茛科)18个微卫星标记的开发及其在同属物种中的交叉扩增

Development of eighteen microsatellite markers in Anemone amurensis (Ranunculaceae) and cross-amplification in congeneric species.

作者信息

Sun Mingzhou, Yin Xiao, Shi Fengxue, Li Lin, Li Mingrui, Li Linfeng, Xiao Hongxing

机构信息

Key Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, Changchun 130024, China.

出版信息

Int J Mol Sci. 2012;13(4):4889-4895. doi: 10.3390/ijms13044889. Epub 2012 Apr 18.

Abstract

Polyploidy plays an important role in the evolution of plant genomes. To enable the investigation of the polyploidy events within the genus Anemone, we developed eighteen microsatellite markers from the hexaploid species A. amurensis (Ranunculaceae), and tested their transferability in five closely related species. The number of total alleles (N(A)) for each resulting locus varied from one to eight. The polymorphism information content (PIC) and Nei's genetic diversity (N(GD)) for these microsatellites ranged from 0.00 to 0.71 and 0.00 to 0.91, respectively. For each population, the N(A) was one to seven, and the values of PIC and N(GD) varied from 0.00 to 0.84 and 0.00 to 0.95, respectively. In addition, most of these microsatellites can be amplified successfully in the congeneric species. These microsatellite primers provide us an opportunity to study the polyploid evolution in the genus Anemone.

摘要

多倍体在植物基因组进化中起着重要作用。为了研究银莲花属内的多倍体事件,我们从六倍体物种东北银莲花(毛茛科)中开发了18个微卫星标记,并测试了它们在五个近缘物种中的可转移性。每个所得位点的总等位基因数(N(A))从1到8不等。这些微卫星的多态性信息含量(PIC)和Nei氏遗传多样性(N(GD))分别在0.00至0.71和0.00至0.91之间。对于每个种群,N(A)为1至7,PIC和N(GD)值分别在0.00至0.84和0.00至0.95之间。此外,这些微卫星中的大多数可以在同属物种中成功扩增。这些微卫星引物为我们研究银莲花属的多倍体进化提供了一个机会。

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