Suppr超能文献

新型细胞变形准三维显微镜的理论分析

Theoretical Analysis of Novel Quasi-3D Microscopy of Cell Deformation.

作者信息

Qiu Jun, Baik Andrew D, Lu X Lucas, Hillman Elizabeth M C, Zhuang Zhuo, Guo X Edward

机构信息

School of Aerospace, Tsinghua University, Beijing, People's Republic of China.

出版信息

Cell Mol Bioeng. 2011 Jun 1;5(2):165-172. doi: 10.1007/s12195-011-0218-3. Epub 2011 Dec 23.

Abstract

A novel quasi-three-dimensional (quasi-3D) microscopy technique has been developed to enable visualization of a cell under dynamic loading in two orthogonal planes simultaneously. The three-dimensional (3D) dynamics of the mechanical behavior of a cell under fluid flow can be examined at a high temporal resolution. In this study, a numerical model of a fluorescently dyed cell was created in 3D space, and the cell was subjected to uniaxial deformation or unidirectional fluid shear flow via finite element analysis (FEA). Therefore, the intracellular deformation in the simulated cells was exactly prescribed. Two-dimensional fluorescent images simulating the quasi-3D technique were created from the cell and its deformed states in 3D space using a point-spread function (PSF) and a convolution operation. These simulated original and deformed images were processed by a digital image correlation technique to calculate quasi-3D-based intracellular strains. The calculated strains were compared to the prescribed strains, thus providing a theoretical basis for the measurement of the accuracy of quasi-3D and wide-field microscopy-based intracellular strain measurements against the true 3D strains. The signal-to-noise ratio (SNR) of the simulated quasi-3D images was also modulated using additive Gaussian noise, and a minimum SNR of 12 was needed to recover the prescribed strains using digital image correlation. Our computational study demonstrated that quasi-3D strain measurements closely recovered the true 3D strains in uniform and fluid flow cellular strain states to within 5% strain error.

摘要

一种新型的准三维(quasi-3D)显微镜技术已经被开发出来,能够同时在两个正交平面上可视化动态加载下的细胞。可以在高时间分辨率下研究细胞在流体流动下机械行为的三维(3D)动力学。在本研究中,在三维空间中创建了一个荧光染色细胞的数值模型,并通过有限元分析(FEA)使细胞承受单轴变形或单向流体剪切流。因此,模拟细胞中的细胞内变形被精确规定。使用点扩散函数(PSF)和卷积运算,从三维空间中的细胞及其变形状态创建模拟准三维技术的二维荧光图像。这些模拟的原始图像和变形图像通过数字图像相关技术进行处理,以计算基于准三维的细胞内应变。将计算得到的应变与规定的应变进行比较,从而为准三维和基于宽视场显微镜的细胞内应变测量相对于真实三维应变的测量精度提供理论依据。还使用加性高斯噪声调制模拟准三维图像的信噪比(SNR),使用数字图像相关恢复规定应变需要的最小信噪比为12。我们的计算研究表明,在均匀和流体流动细胞应变状态下,准三维应变测量能够紧密恢复真实三维应变,应变误差在5%以内。

相似文献

1
Theoretical Analysis of Novel Quasi-3D Microscopy of Cell Deformation.
Cell Mol Bioeng. 2011 Jun 1;5(2):165-172. doi: 10.1007/s12195-011-0218-3. Epub 2011 Dec 23.
2
Quasi-3D cytoskeletal dynamics of osteocytes under fluid flow.
Biophys J. 2010 Nov 3;99(9):2812-20. doi: 10.1016/j.bpj.2010.08.064.
5
Implications of resolution and noise for in vivo micro-MRI of trabecular bone.
Med Phys. 2008 Dec;35(12):5584-94. doi: 10.1118/1.3005598.
6
Image-based Modeling of PSF Deformation with Application to Limited Angle PET Data.
IEEE Trans Nucl Sci. 2016 Oct;63(5):2599-2606. doi: 10.1109/TNS.2016.2607019. Epub 2016 Sep 8.
8
Discovering 3D hidden elasticity in isotropic and transversely isotropic materials with physics-informed UNets.
Acta Biomater. 2024 Aug;184:254-263. doi: 10.1016/j.actbio.2024.06.038. Epub 2024 Jul 2.
9
Three-dimensional analysis of a noise barrier using a quasi-periodic boundary element method.
J Acoust Soc Am. 2015 Jun;137(6):3107-14. doi: 10.1121/1.4921266.
10
Fluorescent stereo microscopy for 3D surface profilometry and deformation mapping.
Opt Express. 2013 May 20;21(10):11808-18. doi: 10.1364/OE.21.011808.

引用本文的文献

1
Displacement and strain mapping for osteocytes under fluid shear stress using digital holographic microscopy and digital image correlation.
Biomed Opt Express. 2021 Mar 9;12(4):1922-1933. doi: 10.1364/BOE.418418. eCollection 2021 Apr 1.
2
Cartilage Wear Particles Induce an Inflammatory Response Similar to Cytokines in Human Fibroblast-Like Synoviocytes.
J Orthop Res. 2019 Sep;37(9):1979-1987. doi: 10.1002/jor.24340. Epub 2019 May 17.
3
A noninvasive approach to determine viscoelastic properties of an individual adherent cell under fluid flow.
J Biomech. 2014 Apr 11;47(6):1537-41. doi: 10.1016/j.jbiomech.2014.01.056. Epub 2014 Feb 14.
4
Simultaneous tracking of 3D actin and microtubule strains in individual MLO-Y4 osteocytes under oscillatory flow.
Biochem Biophys Res Commun. 2013 Feb 22;431(4):718-23. doi: 10.1016/j.bbrc.2013.01.052. Epub 2013 Jan 23.

本文引用的文献

1
Quasi-3D cytoskeletal dynamics of osteocytes under fluid flow.
Biophys J. 2010 Nov 3;99(9):2812-20. doi: 10.1016/j.bpj.2010.08.064.
2
Model Convolution: A Computational Approach to Digital Image Interpretation.
Cell Mol Bioeng. 2010 Jun;3(2):163-170. doi: 10.1007/s12195-010-0101-7. Epub 2010 Feb 6.
3
Direct measurement of shear strain in adherent vascular endothelial cells exposed to fluid shear stress.
Biochem Biophys Res Commun. 2010 Mar 26;394(1):94-9. doi: 10.1016/j.bbrc.2010.02.115. Epub 2010 Feb 20.
4
Asymmetric intercellular communication between bone cells: propagation of the calcium signaling.
Biochem Biophys Res Commun. 2009 Nov 20;389(3):495-500. doi: 10.1016/j.bbrc.2009.09.010. Epub 2009 Sep 6.
5
A model for the role of integrins in flow induced mechanotransduction in osteocytes.
Proc Natl Acad Sci U S A. 2007 Oct 2;104(40):15941-6. doi: 10.1073/pnas.0707246104. Epub 2007 Sep 25.
7
Hypothesis testing via integrated computer modeling and digital fluorescence microscopy.
Methods. 2007 Feb;41(2):232-7. doi: 10.1016/j.ymeth.2006.08.002.
9
Chondrocyte deformation induces mitochondrial distortion and heterogeneous intracellular strain fields.
Biomech Model Mechanobiol. 2006 Jun;5(2-3):180-91. doi: 10.1007/s10237-006-0020-7. Epub 2006 Mar 7.
10
Mapping mechanical strain of an endogenous cytoskeletal network in living endothelial cells.
Biophys J. 2003 Apr;84(4):2691-9. doi: 10.1016/S0006-3495(03)75074-7.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验