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β2-联糖蛋白 PDZ 结构域的平衡展开。

Equilibrium unfolding of the PDZ domain of β2-syntrophin.

机构信息

Departamento de Ciencia y Tecnología, Universidad Nacional de Quilmes, Bernal, Buenos Aires, Argentina.

出版信息

Biophys J. 2012 Jun 20;102(12):2835-44. doi: 10.1016/j.bpj.2012.05.021. Epub 2012 Jun 19.

Abstract

β2-syntrophin, a dystrophin-associated protein, plays a pivotal role in insulin secretion by pancreatic β-cells. It contains a PDZ domain (β2S-PDZ) that, in complex with protein-tyrosine phosphatase ICA512, anchors the dense insulin granules to actin filaments. The phosphorylation state of β2-syntrophin allosterically regulates the affinity of β2S-PDZ for ICA512, and the disruption of the complex triggers the mobilization of the insulin granule stores. Here, we investigate the thermal unfolding of β2S-PDZ at different pH and urea concentrations. Our results indicate that, unlike other PDZ domains, β2S-PDZ is marginally stable. Thermal denaturation experiments show broad transitions and cold denaturation, and a two-state model fit reveals a significant unfolded fraction under physiological conditions. Furthermore, T(m) and T(max) denaturant-dependent shifts and noncoincidence of melting curves monitored at different wavelengths suggest that two-state and three-state models fail to explain the equilibrium data properly and are in better agreement with a downhill scenario. Its higher stability at pH >9 and the results of molecular dynamics simulations indicate that this behavior of β2S-PDZ might be related to its charge distribution. All together, our results suggest a link between the conformational plasticity of the native ensemble of this PDZ domain and the regulation of insulin secretion.

摘要

β2-联糖蛋白是一种与肌营养不良蛋白相关的蛋白,在胰岛β细胞的胰岛素分泌中起着关键作用。它包含一个 PDZ 结构域(β2S-PDZ),与蛋白酪氨酸磷酸酶 ICA512 结合,将致密的胰岛素颗粒锚定在肌动蛋白丝上。β2-联糖蛋白的磷酸化状态变构调节β2S-PDZ 与 ICA512 的亲和力,复合物的破坏触发胰岛素颗粒储存的动员。在这里,我们研究了不同 pH 和脲浓度下β2S-PDZ 的热变性。我们的结果表明,与其他 PDZ 结构域不同,β2S-PDZ 的稳定性较差。热变性实验显示出广泛的转变和冷变性,并且两态模型拟合显示在生理条件下存在显著的未折叠部分。此外,T(m)和 T(max)变构依赖性位移以及在不同波长监测的熔化曲线的非一致性表明,两态和三态模型不能正确解释平衡数据,与下降模型更一致。其在 pH>9 时的更高稳定性和分子动力学模拟的结果表明,β2S-PDZ 的这种行为可能与其电荷分布有关。总之,我们的结果表明,这种 PDZ 结构域天然构象的构象可塑性与胰岛素分泌的调节之间存在联系。

相似文献

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Equilibrium unfolding of the PDZ domain of β2-syntrophin.β2-联糖蛋白 PDZ 结构域的平衡展开。
Biophys J. 2012 Jun 20;102(12):2835-44. doi: 10.1016/j.bpj.2012.05.021. Epub 2012 Jun 19.

本文引用的文献

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Proc Natl Acad Sci U S A. 2012 Jan 3;109(1):179-84. doi: 10.1073/pnas.1111164109. Epub 2011 Dec 19.
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SMOG@ctbp: simplified deployment of structure-based models in GROMACS.SMOG@ctbp:在 GROMACS 中简化基于结构的模型的部署。
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W657-61. doi: 10.1093/nar/gkq498. Epub 2010 Jun 4.
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Hidden dynamic allostery in a PDZ domain.PDZ结构域中的隐藏动态变构
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