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多聚体 BLM 在 ATP 水解时解离,并作为单体发挥作用以解决 DNA 结构。

Multimeric BLM is dissociated upon ATP hydrolysis and functions as monomers in resolving DNA structures.

机构信息

Beijing National Laboratory for Condensed Matter Physics and CAS Key Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China.

出版信息

Nucleic Acids Res. 2012 Oct;40(19):9802-14. doi: 10.1093/nar/gks728. Epub 2012 Aug 9.

DOI:10.1093/nar/gks728
PMID:22885301
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3479192/
Abstract

Bloom (BLM) syndrome is an autosomal recessive disorder characterized by an increased risk for many types of cancers. Previous studies have shown that BLM protein forms a hexameric ring structure, but its oligomeric form in DNA unwinding is still not well clarified. In this work, we have used dynamic light scattering and various stopped-flow assays to study the active form and kinetic mechanism of BLM in DNA unwinding. It was found that BLM multimers were dissociated upon ATP hydrolysis. Steady-state and single-turnover kinetic studies revealed that BLM helicase always unwound duplex DNA in the monomeric form under conditions of varying enzyme and ATP concentrations as well as 3'-ssDNA tail lengths, with no sign of oligomerization being discerned. Measurements of ATPase activity further indicated that BLM helicase might still function as monomers in resolving highly structured DNAs such as Holliday junctions and D-loops. These results shed new light on the underlying mechanism of BLM-mediated DNA unwinding and on the molecular and functional basis for the phenotype of heterozygous carriers of BLM syndrome.

摘要

布卢姆综合征(BLM)是一种常染色体隐性遗传病,其特征是多种癌症的风险增加。先前的研究表明,BLM 蛋白形成六聚体环结构,但在 DNA 解旋过程中的寡聚形式仍未得到很好的阐明。在这项工作中,我们使用动态光散射和各种停流测定法研究了 BLM 在 DNA 解旋中的活性形式和动力学机制。结果发现,BLM 多聚体在 ATP 水解时解离。稳态和单轮动力学研究表明,BLM 解旋酶在不同酶和 ATP 浓度以及 3'-ssDNA 尾长条件下,总是以单体形式解旋双链 DNA,没有发现寡聚化的迹象。ATPase 活性的测量进一步表明,BLM 解旋酶在解析高度结构化的 DNA (如 Holliday 连接和 D 环)时,可能仍然以单体形式发挥作用。这些结果为 BLM 介导的 DNA 解旋的潜在机制以及 BLM 综合征杂合子携带者表型的分子和功能基础提供了新的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/82ff4d3785df/gks728f8p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/0440ec947ead/gks728f1p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/aaeeab3667d0/gks728f2p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/2aa33869d141/gks728f3p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/5a46267f8eec/gks728f4p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/f354c3075162/gks728f5p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/86d9964735fe/gks728f6p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/3c261c186c28/gks728f7p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/82ff4d3785df/gks728f8p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/0440ec947ead/gks728f1p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/aaeeab3667d0/gks728f2p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/2aa33869d141/gks728f3p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/5a46267f8eec/gks728f4p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/f354c3075162/gks728f5p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/86d9964735fe/gks728f6p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/3c261c186c28/gks728f7p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6022/3479192/82ff4d3785df/gks728f8p.jpg

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本文引用的文献

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2
Kinetic mechanism of DNA unwinding by the BLM helicase core and molecular basis for its low processivity.BLM 解旋酶核心的 DNA 解旋动力学机制及其低延伸性的分子基础。
Biochemistry. 2010 Feb 2;49(4):656-68. doi: 10.1021/bi901459c.
3
RecQ helicases: multiple structures for multiple functions?RecQ解旋酶:多种功能对应多种结构?
Bloom 解旋酶在 DNA 末端加工过程中介导大的单链 DNA 环的形成。
Nat Commun. 2022 Apr 26;13(1):2248. doi: 10.1038/s41467-022-29937-7.
4
RQC helical hairpin in Bloom's syndrome helicase regulates DNA unwinding by dynamically intercepting nascent nucleotides.布卢姆综合征解旋酶中的RQC螺旋发夹通过动态拦截新生核苷酸来调节DNA解旋。
iScience. 2021 Dec 10;25(1):103606. doi: 10.1016/j.isci.2021.103606. eCollection 2022 Jan 21.
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RNF4 Regulates the BLM Helicase in Recovery From Replication Fork Collapse.RNF4在复制叉坍塌恢复过程中调控BLM解旋酶。
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