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核仁中 APE1 的积累依赖于带电赖氨酸残基,这些残基在遗传毒性应激下发生乙酰化修饰,并调节其在细胞中的 BER 活性。

Nucleolar accumulation of APE1 depends on charged lysine residues that undergo acetylation upon genotoxic stress and modulate its BER activity in cells.

机构信息

Department of Medical and Biological Sciences, University of Udine, 33100 Udine, Italy.

出版信息

Mol Biol Cell. 2012 Oct;23(20):4079-96. doi: 10.1091/mbc.E12-04-0299. Epub 2012 Aug 23.

DOI:10.1091/mbc.E12-04-0299
PMID:22918947
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3469522/
Abstract

Apurinic/apyrimidinic endonuclease 1 (APE1) is the main abasic endonuclease in the base excision repair (BER) pathway of DNA lesions caused by oxidation/alkylation in mammalian cells; within nucleoli it interacts with nucleophosmin and rRNA through N-terminal Lys residues, some of which (K(27)/K(31)/K(32)/K(35)) may undergo acetylation in vivo. Here we study the functional role of these modifications during genotoxic damage and their in vivo relevance. We demonstrate that cells expressing a specific K-to-A multiple mutant are APE1 nucleolar deficient and are more resistant to genotoxic treatment than those expressing the wild type, although they show impaired proliferation. Of interest, we find that genotoxic treatment induces acetylation at these K residues. We also find that the charged status of K(27)/K(31)/K(32)/K(35) modulates acetylation at K(6)/K(7) residues that are known to be involved in the coordination of BER activity through a mechanism regulated by the sirtuin 1 deacetylase. Of note, structural studies show that acetylation at K(27)/K(31)/K(32)/K(35) may account for local conformational changes on APE1 protein structure. These results highlight the emerging role of acetylation of critical Lys residues in regulating APE1 functions. They also suggest the existence of cross-talk between different Lys residues of APE1 occurring upon genotoxic damage, which may modulate APE1 subnuclear distribution and enzymatic activity in vivo.

摘要

脱嘌呤/脱嘧啶核酸内切酶 1(APE1)是哺乳动物细胞中氧化/烷基化导致的 DNA 损伤碱基切除修复(BER)途径中的主要无碱基核酸内切酶;在核仁中,它通过 N 端赖氨酸残基与核仁蛋白和 rRNA 相互作用,其中一些(K(27)/K(31)/K(32)/K(35))可能在体内发生乙酰化。在这里,我们研究了这些修饰在遗传毒性损伤过程中的功能作用及其体内相关性。我们证明,表达特定 K 到 A 多位点突变的细胞是 APE1 核仁缺陷的,并且比表达野生型的细胞对遗传毒性处理更具抗性,尽管它们表现出增殖受损。有趣的是,我们发现遗传毒性处理会诱导这些 K 残基发生乙酰化。我们还发现,K(27)/K(31)/K(32)/K(35)的电荷状态调节 K(6)/K(7)残基的乙酰化,已知这些残基通过 sirtuin 1 去乙酰化酶调节的机制参与 BER 活性的协调。值得注意的是,结构研究表明,K(27)/K(31)/K(32)/K(35)的乙酰化可能导致 APE1 蛋白结构的局部构象变化。这些结果突出了关键赖氨酸残基乙酰化在调节 APE1 功能方面的新兴作用。它们还表明,在遗传毒性损伤时,APE1 中不同赖氨酸残基之间可能存在交叉对话,这可能调节 APE1 在体内的亚核分布和酶活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/eccece914b5e/4079fig8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/9739d32a7ee6/4079fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/3aa193694171/4079fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/fae85cf7b3bf/4079fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/2a95a3e73bd4/4079fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/186eb006e79d/4079fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/eec4d8209bff/4079fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/a9759179decb/4079fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/eccece914b5e/4079fig8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/9739d32a7ee6/4079fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/3aa193694171/4079fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/fae85cf7b3bf/4079fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/2a95a3e73bd4/4079fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/186eb006e79d/4079fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/eec4d8209bff/4079fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/a9759179decb/4079fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5390/3469522/eccece914b5e/4079fig8.jpg

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1
The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.用于生物大分子的计算机支持的 NMR 光谱分析的 XEASY 程序。
J Biomol NMR. 1995 Jul;6(1):1-10. doi: 10.1007/BF00417486.
2
Acetylation on critical lysine residues of Apurinic/apyrimidinic endonuclease 1 (APE1) in triple negative breast cancers.三阴性乳腺癌中脱嘌呤/脱嘧啶核酸内切酶 1(APE1)关键赖氨酸残基的乙酰化。
Biochem Biophys Res Commun. 2012 Jul 20;424(1):34-9. doi: 10.1016/j.bbrc.2012.06.039. Epub 2012 Jun 16.
3
Human AP endonuclease/redox factor APE1/ref-1 modulates mitochondrial function after oxidative stress by regulating the transcriptional activity of NRF1.
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DNA Repair (Amst). 2024 Dec;144:103776. doi: 10.1016/j.dnarep.2024.103776. Epub 2024 Oct 19.
4
The Unknown within the Known: Nucleolus, Understudied Compartment in the Filamentous Fungi.已知中的未知:丝状真菌中研究不足的核仁区室
Mycobiology. 2024 Jul 22;52(4):214-221. doi: 10.1080/12298093.2024.2379623. eCollection 2024.
5
Monitoring nucleolar-nucleoplasmic protein shuttling in living cells by high-content microscopy and automated image analysis.通过高内涵显微镜和自动化图像分析监测活细胞中的核仁-核质蛋白穿梭。
Nucleic Acids Res. 2024 Aug 27;52(15):e72. doi: 10.1093/nar/gkae598.
6
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Oncogene. 2024 Jun;43(24):1861-1876. doi: 10.1038/s41388-024-03039-8. Epub 2024 Apr 25.
7
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人类 AP 内切核酸酶/氧化还原因子 APE1/ref-1 通过调节 NRF1 的转录活性来调节线粒体功能在氧化应激后。
Free Radic Biol Med. 2012 Jul 15;53(2):237-48. doi: 10.1016/j.freeradbiomed.2012.04.002. Epub 2012 May 11.
4
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7
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8
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Methods Mol Med. 1999;28:17-23. doi: 10.1385/1-59259-687-8:17.
10
Human serum albumin modifications associated with reductive radical stress.与还原性自由基应激相关的人血清白蛋白修饰
Mol Biosyst. 2011 Mar;7(3):889-98. doi: 10.1039/c0mb00223b. Epub 2010 Dec 15.