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植物细胞质 tRNA(Arg)ACG 反密码子中不存在 A-to-I 编辑,这要求放宽摆动解码规则。

The absence of A-to-I editing in the anticodon of plant cytoplasmic tRNA (Arg) ACG demands a relaxation of the wobble decoding rules.

机构信息

Institut für Biologie III, Universität Freiburg, Freiburg, Germany.

出版信息

RNA Biol. 2012 Oct;9(10):1239-46. doi: 10.4161/rna.21839. Epub 2012 Aug 24.

Abstract

It is a prevalent concept that, in line with the Wobble Hypothesis, those tRNAs having an adenosine in the first position of the anticodon become modified to an inosine at this position. Sequencing the cDNA derived from the gene coding for cytoplasmic tRNA (Arg) ACG from several higher plants as well as mass spectrometric analysis of the isoacceptor has revealed that for this kingdom an unmodified A in the wobble position of the anticodon is the rule rather than the exception. In vitro translation shows that in the plant system the absence of inosine in the wobble position of tRNA (Arg) does not prevent decoding. This isoacceptor belongs to the class of tRNA that is imported from the cytoplasm into the mitochondria of higher plants. Previous studies on the mitochondrial tRNA pool have demonstrated the existence of tRNA (Arg) ICG in this organelle. In moss the mitochondrial encoded distinct tRNA (Arg) ACG isoacceptor possesses the I34 modification. The implication is that for mitochondrial protein biosynthesis A-to-I editing is necessary and occurs by a mitochondrion-specific deaminase after import of the unmodified nuclear encoded tRNA (Arg) ACG.

摘要

有一种流行的观点认为,根据摆动假说,那些反密码子第一位是腺嘌呤的 tRNA 会在这个位置被修饰成肌苷。对几种高等植物细胞质 tRNA(Arg)ACG 编码基因的 cDNA 进行测序以及对同工受体进行质谱分析表明,对于这个生物界来说,反密码子摆动位置的未修饰 A 是规则而不是例外。体外翻译表明,在植物系统中,tRNA(Arg)的摆动位置没有肌苷并不会阻止解码。这种同工受体属于从细胞质导入高等植物线粒体的 tRNA 类别。先前对线粒体 tRNA 池的研究表明,该细胞器中存在 tRNA(Arg)ICG。在苔藓中,线粒体编码的独特 tRNA(Arg)ACG 同工受体具有 I34 修饰。这意味着对于线粒体蛋白生物合成,A-to-I 编辑是必要的,并且在未修饰的核编码 tRNA(Arg)ACG 导入后,通过一种特定于线粒体的脱氨酶发生。

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