The William G. Lowrie Department of Chemical & Biomolecular Engineering, Ohio State University, 140 W. 19th Avenue, Columbus, OH 43210, USA.
Math Biosci. 2013 Jan;241(1):1-23. doi: 10.1016/j.mbs.2012.08.002. Epub 2012 Aug 21.
In a recent paper it was shown that, for chemical reaction networks possessing a subtle structural property called concordance, dynamical behavior of a very circumscribed (and largely stable) kind is enforced, so long as the kinetics lies within the very broad and natural weakly monotonic class. In particular, multiple equilibria are precluded, as are degenerate positive equilibria. Moreover, under certain circumstances, also related to concordance, all real eigenvalues associated with a positive equilibrium are negative. Although concordance of a reaction network can be decided by readily available computational means, we show here that, when a nondegenerate network's Species-Reaction Graph satisfies certain mild conditions, concordance and its dynamical consequences are ensured. These conditions are weaker than earlier ones invoked to establish kinetic system injectivity, which, in turn, is just one ramification of network concordance. Because the Species-Reaction Graph resembles pathway depictions often drawn by biochemists, results here expand the possibility of inferring significant dynamical information directly from standard biochemical reaction diagrams.
在最近的一篇论文中表明,对于具有称为协调性的微妙结构性质的化学反应网络,只要动力学处于非常广泛和自然的弱单调类中,就会强制实施非常有限(且在很大程度上稳定)的动力学行为。特别是,排除了多个平衡点,也排除了简并正平衡点。此外,在某些情况下,也与协调性有关,与正平衡点相关的所有实特征值均为负。尽管可以通过现成的计算手段来确定反应网络的协调性,但我们在这里表明,当非简并网络的“物种-反应图”满足某些温和条件时,协调性及其动力学后果就得到了保证。这些条件比以前为建立动力学系统注入性而提出的条件要弱,而动力学系统注入性反过来又是网络协调性的一个分支。由于“物种-反应图”类似于生物化学家经常绘制的途径图,因此这里的结果扩展了直接从标准生化反应图推断重要动力学信息的可能性。