• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Spatial distribution of radiation damage to crystalline proteins at 25-300 K.25至300K温度下晶体蛋白质辐射损伤的空间分布。
Acta Crystallogr D Biol Crystallogr. 2012 Sep;68(Pt 9):1108-17. doi: 10.1107/S0907444912021361. Epub 2012 Aug 18.
2
Glass transition in thaumatin crystals revealed through temperature-dependent radiation-sensitivity measurements.通过与温度相关的辐射敏感性测量揭示奇异果甜蛋白晶体中的玻璃化转变
Acta Crystallogr D Biol Crystallogr. 2010 Oct;66(Pt 10):1092-100. doi: 10.1107/S0907444910035523. Epub 2010 Sep 18.
3
Solvent flows, conformation changes and lattice reordering in a cold protein crystal.溶剂流动、构象变化和晶格重排在冷蛋白质晶体中。
Acta Crystallogr D Struct Biol. 2019 Nov 1;75(Pt 11):980-994. doi: 10.1107/S2059798319013822. Epub 2019 Oct 31.
4
Chemical cross-linking and mass spectrometric identification of sites of interaction for UreD, UreF, and urease.脲酶激活蛋白UreD、UreF与脲酶相互作用位点的化学交联及质谱鉴定
J Biol Chem. 2004 Apr 9;279(15):15305-13. doi: 10.1074/jbc.M312979200. Epub 2004 Jan 28.
5
Structure of Rv1848 (UreA), the Mycobacterium tuberculosis urease gamma subunit.结核分枝杆菌脲酶γ亚基Rv1848(UreA)的结构
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jul 1;66(Pt 7):781-6. doi: 10.1107/S1744309110019536. Epub 2010 Jun 23.
6
Structures of Cys319 variants and acetohydroxamate-inhibited Klebsiella aerogenes urease.Cys319变体与乙酰氧肟酸抑制的产气克雷伯菌脲酶的结构
Biochemistry. 1997 Jul 1;36(26):8164-72. doi: 10.1021/bi970514j.
7
Kinetic and structural characterization of urease active site variants.脲酶活性位点变体的动力学和结构表征
Biochemistry. 2000 Jul 25;39(29):8575-84. doi: 10.1021/bi000613o.
8
Slow cooling of protein crystals.蛋白质晶体的缓慢冷却。
J Appl Crystallogr. 2009 Oct 1;42(Pt 5):944-952. doi: 10.1107/S0021889809023553. Epub 2009 Aug 1.
9
Specific protein dynamics near the solvent glass transition assayed by radiation-induced structural changes.通过辐射诱导的结构变化测定溶剂玻璃化转变附近的特定蛋白质动力学。
Protein Sci. 2001 Oct;10(10):1953-61. doi: 10.1110/ps.09801.
10
Function of UreB in Klebsiella aerogenes urease.产气克雷伯氏菌脲酶中 UreB 的功能。
Biochemistry. 2011 Nov 1;50(43):9296-308. doi: 10.1021/bi2011064. Epub 2011 Oct 6.

引用本文的文献

1
Temperature-Resolved Crystallography Reveals Rigid-Body Dominance over Local Flexibility in B‑Factors.温度分辨晶体学揭示了B因子中刚体对局部柔性的主导作用。
ACS Omega. 2025 Aug 20;10(34):38871-38881. doi: 10.1021/acsomega.5c04454. eCollection 2025 Sep 2.
2
Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.评估室温(277 K)和低温冷冻条件下 X 射线损伤对蛋白质晶体构象异质性的影响。
Acta Crystallogr D Struct Biol. 2022 Aug 1;78(Pt 8):945-963. doi: 10.1107/S2059798322005939. Epub 2022 Jul 14.
3
Solvent flows, conformation changes and lattice reordering in a cold protein crystal.溶剂流动、构象变化和晶格重排在冷蛋白质晶体中。
Acta Crystallogr D Struct Biol. 2019 Nov 1;75(Pt 11):980-994. doi: 10.1107/S2059798319013822. Epub 2019 Oct 31.
4
Solving a new R2lox protein structure by microcrystal electron diffraction.通过微晶体电子衍射解决新的 R2lox 蛋白质结构问题。
Sci Adv. 2019 Aug 7;5(8):eaax4621. doi: 10.1126/sciadv.aax4621. eCollection 2019 Aug.
5
Journey to the center of the protein: allostery from multitemperature multiconformer X-ray crystallography.探索蛋白质的核心奥秘:多温度多构象 X 射线晶体学揭示别构效应。
Acta Crystallogr D Struct Biol. 2019 Feb 1;75(Pt 2):123-137. doi: 10.1107/S2059798318017941. Epub 2019 Jan 28.
6
Conformational variation of proteins at room temperature is not dominated by radiation damage.蛋白质在室温下的构象变化并非由辐射损伤主导。
J Synchrotron Radiat. 2017 Jan 1;24(Pt 1):73-82. doi: 10.1107/S1600577516017343.
7
Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.通过多温度和X射线自由电子激光晶体学绘制动态酶的构象图谱。
Elife. 2015 Sep 30;4:e07574. doi: 10.7554/eLife.07574.
8
Identifying and quantifying radiation damage at the atomic level.在原子层面识别并量化辐射损伤。
J Synchrotron Radiat. 2015 Mar;22(2):201-12. doi: 10.1107/S1600577515002131. Epub 2015 Feb 14.
9
Temperature-dependent radiation sensitivity and order of 70S ribosome crystals.温度依赖性辐射敏感性与70S核糖体晶体的有序性
Acta Crystallogr D Biol Crystallogr. 2014 Nov;70(Pt 11):2890-6. doi: 10.1107/S1399004714017672. Epub 2014 Oct 23.
10
Identification of patterns in diffraction intensities affected by radiation exposure.辐射暴露影响的衍射强度模式的识别。
J Synchrotron Radiat. 2013 Jan;20(Pt 1):37-48. doi: 10.1107/S0909049512048807. Epub 2012 Dec 6.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Global radiation damage at 300 and 260 K with dose rates approaching 1 MGy s⁻¹.在300K和260K温度下,剂量率接近1 MGy s⁻¹时的整体辐射损伤。
Acta Crystallogr D Biol Crystallogr. 2012 Feb;68(Pt 2):124-33. doi: 10.1107/S0907444911052085. Epub 2012 Jan 17.
3
Can radiation damage to protein crystals be reduced using small-molecule compounds?使用小分子化合物能否减少辐射对蛋白质晶体的损伤?
Acta Crystallogr D Biol Crystallogr. 2011 Oct;67(Pt 10):881-93. doi: 10.1107/S0907444911032835. Epub 2011 Sep 8.
4
Accessing protein conformational ensembles using room-temperature X-ray crystallography.利用室温 X 射线晶体学获取蛋白质构象组。
Proc Natl Acad Sci U S A. 2011 Sep 27;108(39):16247-52. doi: 10.1073/pnas.1111325108. Epub 2011 Sep 14.
5
Dark progression reveals slow timescales for radiation damage between T = 180 and 240 K.暗态进展表明在180至240开尔文之间辐射损伤的时间尺度较慢。
Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):792-803. doi: 10.1107/S0907444911027600. Epub 2011 Aug 9.
6
Similarities and differences in radiation damage at 100 K versus 160 K in a crystal of thermolysin.在 100K 和 160K 温度下晶体中热稳定蛋白酶的辐射损伤的异同。
J Synchrotron Radiat. 2011 May;18(Pt 3):329-37. doi: 10.1107/S0909049511007631. Epub 2011 Apr 9.
7
ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules.ROSETTA3:一个用于大分子模拟与设计的面向对象软件套件。
Methods Enzymol. 2011;487:545-74. doi: 10.1016/B978-0-12-381270-4.00019-6.
8
Glass transition in thaumatin crystals revealed through temperature-dependent radiation-sensitivity measurements.通过与温度相关的辐射敏感性测量揭示奇异果甜蛋白晶体中的玻璃化转变
Acta Crystallogr D Biol Crystallogr. 2010 Oct;66(Pt 10):1092-100. doi: 10.1107/S0907444910035523. Epub 2010 Sep 18.
9
Coupled motions in enzyme catalysis.酶催化中的偶联运动。
Curr Opin Chem Biol. 2010 Oct;14(5):644-51. doi: 10.1016/j.cbpa.2010.07.020. Epub 2010 Aug 20.
10
Automated electron-density sampling reveals widespread conformational polymorphism in proteins.自动化电子密度采样揭示了蛋白质中广泛存在的构象多态性。
Protein Sci. 2010 Jul;19(7):1420-31. doi: 10.1002/pro.423.

25至300K温度下晶体蛋白质辐射损伤的空间分布。

Spatial distribution of radiation damage to crystalline proteins at 25-300 K.

作者信息

Warkentin Matthew, Badeau Ryan, Hopkins Jesse B, Thorne Robert E

机构信息

Physics Department, Cornell University, Ithaca, NY 14853, USA.

出版信息

Acta Crystallogr D Biol Crystallogr. 2012 Sep;68(Pt 9):1108-17. doi: 10.1107/S0907444912021361. Epub 2012 Aug 18.

DOI:10.1107/S0907444912021361
PMID:22948911
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3489100/
Abstract

The spatial distribution of radiation damage (assayed by increases in atomic B factors) to thaumatin and urease crystals at temperatures ranging from 25 to 300 K is reported. The nature of the damage changes dramatically at approximately 180 K. Above this temperature the role of solvent diffusion is apparent in thaumatin crystals, as solvent-exposed turns and loops are especially sensitive. In urease, a flap covering the active site is the most sensitive part of the molecule and nearby loops show enhanced sensitivity. Below 180 K sensitivity is correlated with poor local packing, especially in thaumatin. At all temperatures, the component of the damage that is spatially uniform within the unit cell accounts for more than half of the total increase in the atomic B factors and correlates with changes in mosaicity. This component may arise from lattice-level, rather than local, disorder. The effects of primary structure on radiation sensitivity are small compared with those of tertiary structure, local packing, solvent accessibility and crystal contacts.

摘要

报道了在25至300K温度范围内,奇异果甜蛋白和脲酶晶体辐射损伤(通过原子B因子增加来测定)的空间分布。损伤的性质在约180K时发生显著变化。在此温度以上,溶剂扩散在奇异果甜蛋白晶体中的作用明显,因为暴露于溶剂的转角和环特别敏感。在脲酶中,覆盖活性位点的一个瓣片是分子中最敏感的部分,附近的环显示出增强的敏感性。低于180K时,敏感性与局部堆积不良相关,尤其是在奇异果甜蛋白中。在所有温度下,晶胞内空间均匀的损伤成分占原子B因子总增加量的一半以上,并且与镶嵌性变化相关。该成分可能源于晶格水平而非局部无序。与三级结构、局部堆积、溶剂可及性和晶体接触相比,一级结构对辐射敏感性的影响较小。