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韩国首例柏氏罗尔斯顿菌菌血症病例发生于一位吸入性肺炎患者。

First Korean case of Robinsoniella peoriensis bacteremia in a patient with aspiration pneumonia.

机构信息

Department of Laboratory Medicine, Seoul National University Hospital, Seoul, Korea.

出版信息

Ann Lab Med. 2012 Sep;32(5):370-4. doi: 10.3343/alm.2012.32.5.370. Epub 2012 Aug 13.

Abstract

Robinsoniella peoriensis has recently been identified as a Gram-positive, spore-forming, anaerobic rod originally recovered from swine manure storage pits. To date, 6 cases of R. peoriensis infection have been reported, including 2 cases of bacteremia, 1 of abdominal fluid collection, and 3 of wound infection. In the present study, we report a 76-yr-old man with R. peoriensis bacteremia who developed aspiration pneumonia. Gram staining of a purified colony revealed Gram-positive, rod-shaped bacteria. Biochemical identification using API 20 A (bioMérieux, France) indicated presence of Clostridium spp. We performed both 500-bp and full-gene sequencing of 16S rRNA of the isolate. The sequence was analyzed with MicroSeq ID 16S rRNA Library v2.0 (Applied Biosystems, USA), GenBank Basic Local Alignment Search Tool (BLAST) (http://www.ncbi.nlm.nih.gov/genbank), and EzTaxon database v2.1 (http://www.eztaxon.org). The 500-bp 16S rRNA sequence of the blood culture isolate showed 99.16-99.79% similarity with R. peoriensis and the full-gene 16S rRNA sequence showed 98.87-99.50% similarity with R. peoriensis. The organism was confirmed as R. peoriensis by using all of the mentioned databases except for MicroSeq, which did not include the RNA sequence of this bacterium. This case suggests that identification of R. peoriensis might be challenging in clinical laboratories with no access to molecular methods, as certain commercial identification systems may not identify, or may misidentify, this organism. To the best of our knowledge, this is the first report of the isolation of R. peoriensis in Korea.

摘要

佩氏罗宾逊氏菌最近被鉴定为一种革兰氏阳性、产芽孢、厌氧杆菌,最初从猪粪储存坑中分离得到。迄今为止,已经报告了 6 例佩氏罗宾逊氏菌感染病例,包括 2 例菌血症、1 例腹腔液收集和 3 例伤口感染。在本研究中,我们报告了 1 例 76 岁男性佩氏罗宾逊氏菌菌血症患者发生吸入性肺炎。纯化菌落的革兰氏染色显示革兰氏阳性、杆状细菌。使用 API 20 A(法国生物梅里埃)进行生化鉴定表明存在梭菌属。我们对分离株的 16S rRNA 进行了 500bp 和全长基因测序。序列使用 MicroSeq ID 16S rRNA 文库 v2.0(Applied Biosystems,美国)、GenBank 基本局部比对搜索工具(BLAST)(http://www.ncbi.nlm.nih.gov/genbank)和 EzTaxon 数据库 v2.1(http://www.eztaxon.org)进行分析。血培养分离株的 500bp 16S rRNA 序列与佩氏罗宾逊氏菌的相似度为 99.16-99.79%,全长 16S rRNA 序列与佩氏罗宾逊氏菌的相似度为 98.87-99.50%。除了 MicroSeq 之外,所有使用的数据库都证实该菌为佩氏罗宾逊氏菌,而 MicroSeq 未包含该细菌的 RNA 序列。由于某些商业鉴定系统可能无法识别或错误识别这种细菌,因此,在没有分子方法的临床实验室中,鉴定佩氏罗宾逊氏菌可能具有挑战性。据我们所知,这是佩氏罗宾逊氏菌在韩国的首次分离报告。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5857/3427827/4c22fdd5340b/alm-32-370-g001.jpg

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