Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK.
Ann Rheum Dis. 2013 Jun;72(6):935-41. doi: 10.1136/annrheumdis-2012-202081. Epub 2012 Sep 6.
Obesity as measured by body mass index (BMI) is one of the major risk factors for osteoarthritis. In addition, genetic overlap has been reported between osteoarthritis and normal adult height variation. We investigated whether this relationship is due to a shared genetic aetiology on a genome-wide scale.
We compared genetic association summary statistics (effect size, p value) for BMI and height from the GIANT consortium genome-wide association study (GWAS) with genetic association summary statistics from the arcOGEN consortium osteoarthritis GWAS. Significance was evaluated by permutation. Replication of osteoarthritis association of the highlighted signals was investigated in an independent dataset. Phenotypic information of height and BMI was accounted for in a separate analysis using osteoarthritis-free controls.
We found significant overlap between osteoarthritis and height (p=3.3×10(-5) for signals with p≤0.05) when the GIANT and arcOGEN GWAS were compared. For signals with p≤0.001 we found 17 shared signals between osteoarthritis and height and four between osteoarthritis and BMI. However, only one of the height or BMI signals that had shown evidence of association with osteoarthritis in the arcOGEN GWAS was also associated with osteoarthritis in the independent dataset: rs12149832, within the FTO gene (combined p=2.3×10(-5)). As expected, this signal was attenuated when we adjusted for BMI.
We found a significant excess of shared signals between both osteoarthritis and height and osteoarthritis and BMI, suggestive of a common genetic aetiology. However, only one signal showed association with osteoarthritis when followed up in a new dataset.
体重指数(BMI)衡量的肥胖是骨关节炎的主要危险因素之一。此外,骨关节炎和正常成人身高变化之间存在遗传重叠。我们研究了这种关系是否是由于全基因组范围内的共同遗传病因引起的。
我们将 GIANT 联盟全基因组关联研究(GWAS)中 BMI 和身高的遗传关联汇总统计数据(效应大小,p 值)与 arcOGEN 联盟骨关节炎 GWAS 中的遗传关联汇总统计数据进行了比较。通过置换检验评估了显著性。在独立数据集上研究了突出信号的骨关节炎关联的复制。在单独的分析中,使用无骨关节炎对照,考虑了身高和 BMI 的表型信息。
当比较 GIANT 和 arcOGEN GWAS 时,我们发现骨关节炎和身高之间存在显著重叠(p=3.3×10(-5),用于 p≤0.05 的信号)。对于 p≤0.001 的信号,我们在骨关节炎和身高之间发现了 17 个共享信号,在骨关节炎和 BMI 之间发现了 4 个共享信号。然而,在 arcOGEN GWAS 中显示与骨关节炎相关的身高或 BMI 信号中,只有一个也与独立数据集的骨关节炎相关:rs12149832,位于 FTO 基因内(合并 p=2.3×10(-5))。正如预期的那样,当我们调整 BMI 时,这个信号会减弱。
我们发现骨关节炎和身高以及骨关节炎和 BMI 之间存在显著的共享信号过多,提示存在共同的遗传病因。然而,当在新数据集进行随访时,只有一个信号与骨关节炎相关。