Rueffler Claus, Metz Johan A J
Mathematics and BioSciences Group, Department of Mathematics, University of Vienna, Nordbergstrasse 15, 1090 Vienna, Austria.
J Math Biol. 2013 Mar;66(4-5):1099-122. doi: 10.1007/s00285-012-0575-0. Epub 2012 Sep 18.
Recently, de-Camino-Beck and Lewis (Bull Math Biol 69:1341-1354, 2007) have presented a method that under certain restricted conditions allows computing the basic reproduction ratio R₀ in a simple manner from life cycle graphs, without, however, giving an explicit indication of these conditions. In this paper, we give various sets of sufficient and generically necessary conditions. To this end, we develop a fully algebraic counterpart of their graph-reduction method which we actually found more useful in concrete applications. Both methods, if they work, give a simple algebraic formula that can be interpreted as the sum of contributions of all fertility loops. This formula can be used in e.g. pest control and conservation biology, where it can complement sensitivity and elasticity analyses. The simplest of the necessary and sufficient conditions is that, for irreducible projection matrices, all paths from birth to reproduction have to pass through a common state. This state may be visible in the state representation for the chosen sampling time, but the passing may also occur in between sampling times, like a seed stage in the case of sampling just before flowering. Note that there may be more than one birth state, like when plants in their first year can already have different sizes at the sampling time. Also the common state may occur only later in life. However, in all cases R₀ allows a simple interpretation as the expected number of new individuals that in the next generation enter the common state deriving from a single individual in this state. We end with pointing to some alternative algebraically simple quantities with properties similar to those of R₀ that may sometimes be used to good effect in cases where no simple formula for R₀ exists.
最近,德 - 卡米诺 - 贝克和刘易斯(《数学生物学通报》69:1341 - 1354,2007年)提出了一种方法,该方法在某些受限条件下允许从生命周期图以简单的方式计算基本繁殖数(R_0),然而,他们并未明确指出这些条件。在本文中,我们给出了多组充分且一般必要的条件。为此,我们开发了他们的图简化方法的完全代数对应方法,实际上我们发现该方法在具体应用中更有用。如果这两种方法可行,它们都会给出一个简单的代数公式,该公式可解释为所有繁殖环贡献的总和。这个公式可用于例如害虫控制和保护生物学领域,在这些领域中它可以补充敏感性和弹性分析。最简单的充分必要条件是,对于不可约投影矩阵,从出生到繁殖的所有路径都必须经过一个共同状态。这个状态在所选采样时间的状态表示中可能是可见的,但这种经过也可能发生在采样时间之间,就像在开花前采样的情况下的种子阶段。请注意,可能有多个出生状态,比如当第一年的植物在采样时已经有不同大小时。同样,共同状态可能只在生命后期出现。然而,在所有情况下,(R_0)都可以简单地解释为下一代进入源自该状态单个个体的共同状态的新个体的预期数量。我们最后指出一些代数形式简单且具有与(R_0)类似性质的替代量,在不存在(R_0)的简单公式的情况下,这些量有时可能会产生良好的效果。