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反馈变构抑制 ATP 磷酸核糖基转移酶的机制。

Mechanism of feedback allosteric inhibition of ATP phosphoribosyltransferase.

机构信息

Mycobacterial Research Division, MRC National Institute for Medical Research, The Ridgeway, Mill Hill, London NW7 1AA, UK.

出版信息

Biochemistry. 2012 Oct 9;51(40):8027-38. doi: 10.1021/bi300808b. Epub 2012 Sep 27.

Abstract

MtATP-phosphoribosyltransferase catalyzes the first and committed step in l-histidine biosynthesis in Mycobacterium tuberculosis and is therefore subjected to allosteric feedback regulation. Because of its essentiality, this enzyme is being studied as a potential target for novel anti-infectives. To understand the basis for its regulation, we characterized the allosteric inhibition using gel filtration, steady-state and pre-steady-state kinetics, and the pH dependence of inhibition and binding. Gel filtration experiments indicate that MtATP-phosphoribosyltransferase is a hexamer in solution, in the presence or absence of l-histidine. Steady-state kinetic studies demonstrate that l-histidine inhibition is uncompetitive versus ATP and noncompetitive versus PRPP. At pH values close to neutrality, a K(ii) value of 4 μM was obtained for l-histidine. Pre-steady-state kinetic experiments indicate that chemistry is not rate-limiting for the overall reaction and that l-histidine inhibition is caused by trapping the enzyme in an inactive conformation. The pH dependence of binding, obtained by nuclear magnetic resonance, indicates that l-histidine binds better as the neutral α-amino group. The pH dependence of inhibition (K(ii)), on the contrary, indicates that l-histidine better inhibits MtATP-phosphoribosytransferase with a neutral imidazole and an ionized α-amino group. These results are combined into a model that accounts for the allosteric inhibition of MtATP-phosphoribosyltransferase.

摘要

MtATP-磷酸核糖基转移酶催化分枝杆菌中 l-组氨酸生物合成的第一步和关键步骤,因此受到变构反馈调节。由于其必需性,该酶正被作为潜在的新型抗感染药物靶点进行研究。为了了解其调节的基础,我们通过凝胶过滤、稳态和预稳态动力学以及抑制和结合的 pH 依赖性来表征变构抑制。凝胶过滤实验表明,MtATP-磷酸核糖基转移酶在存在或不存在 l-组氨酸的情况下在溶液中为六聚体。稳态动力学研究表明,l-组氨酸抑制对 ATP 呈非竞争性,对 PRPP 呈非竞争性。在接近中性的 pH 值下,获得了 4 μM 的 l-组氨酸的 K(ii)值。预稳态动力学实验表明,化学不是整个反应的限速步骤,并且 l-组氨酸抑制是通过将酶捕获在无活性构象中来引起的。通过核磁共振获得的结合的 pH 依赖性表明,l-组氨酸结合得更好,因为中性的α-氨基基团。相反,抑制(K(ii))的 pH 依赖性表明,l-组氨酸具有中性咪唑和离子化的α-氨基基团时,对 MtATP-磷酸核糖基转移酶的抑制作用更好。这些结果结合在一起,形成了一个能够解释 MtATP-磷酸核糖基转移酶变构抑制的模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6c2e/3466779/3c93578fc4d3/bi-2012-00808b_0001.jpg

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