魏斯氏菌科 KCTC 3621T 的基因组草图序列。
Draft genome sequence of Weissella koreensis KCTC 3621T.
机构信息
ChunLab, Inc., Seoul National University, Seoul, Republic of Korea.
出版信息
J Bacteriol. 2012 Oct;194(20):5711-2. doi: 10.1128/JB.01356-12.
Abstract
Weissella koreensis is a Gram-positive, rod-shaped, nonmotile, and facultative anaerobic species belonging to the lactic acid bacteria (LAB). The members of this species have been repeatedly isolated from kimchi (a traditional Korean fermented food) and are known for their beneficial effects on human and animal intestinal microflora through producing various clinically important amino acids such as γ-aminobutyric acid and ornithine. Here we report the genome sequence of the type strain of W. koreensis (KCTC 3621(T)) to provide taxonomic and functional insights into the species.
摘要
韩国魏斯氏菌是一种革兰氏阳性、杆状、非运动性、兼性厌氧的乳酸菌属（LAB）物种。该物种的成员已多次从泡菜（一种传统的韩国发酵食品）中分离出来，因其通过产生各种临床上重要的氨基酸（如γ-氨基丁酸和鸟氨酸）对人和动物肠道微生物群产生有益影响而闻名。在这里，我们报告了 W. koreensis（KCTC 3621（T））的模式菌株的基因组序列，以提供该物种的分类学和功能见解。
相似文献
1
Draft genome sequence of Weissella koreensis KCTC 3621T.魏斯氏菌科 KCTC 3621T 的基因组草图序列。
J Bacteriol. 2012 Oct;194(20):5711-2. doi: 10.1128/JB.01356-12.
2
Genome sequence of Weissella confusa LBAE C39-2, isolated from a wheat sourdough.魏斯氏保加利亚乳杆菌 LBAE C39-2 的基因组序列，该菌分离自小麦酸面团。
J Bacteriol. 2012 Mar;194(6):1608-9. doi: 10.1128/JB.06788-11.
3
Genome Sequence of Weissella cibaria KACC 11862.威氏魏斯氏菌 KACC 11862 基因组序列。
J Bacteriol. 2011 Feb;193(3):797-8. doi: 10.1128/JB.01342-10. Epub 2010 Nov 19.
4
Genomic and metatranscriptomic analyses of Weissella koreensis reveal its metabolic and fermentative features during kimchi fermentation.对魏斯氏菌属的基因组和宏转录组分析揭示了其在泡菜发酵过程中的代谢和发酵特性。
Food Microbiol. 2018 Dec;76:1-10. doi: 10.1016/j.fm.2018.04.003. Epub 2018 Apr 10.
5
Isolation and characterization of lactic acid bacteria strains with ornithine producing capacity from natural sea salt.从天然海盐中分离具有产鸟氨酸能力的乳酸菌菌株及其特性研究。
J Microbiol. 2010 Aug;48(4):467-72. doi: 10.1007/s12275-010-0204-9. Epub 2010 Aug 20.
6
Complete genome sequence of Weissella koreensis KACC 15510, isolated from kimchi.从泡菜中分离得到的 Weissella koreensis KACC 15510 的全基因组序列。
J Bacteriol. 2011 Oct;193(19):5534. doi: 10.1128/JB.05704-11.
7
Weissella koreensis sp. nov., isolated from kimchi.韩国魏斯氏菌新种，从泡菜中分离得到。
Int J Syst Evol Microbiol. 2002 Jul;52(Pt 4):1257-61. doi: 10.1099/00207713-52-4-1257.
8
Weissella kimchii sp. nov., a novel lactic acid bacterium from kimchi.泡菜魏斯氏菌新种，一种源自泡菜的新型乳酸菌。
Int J Syst Evol Microbiol. 2002 Mar;52(Pt 2):507-511. doi: 10.1099/00207713-52-2-507.
9
Weissella diestrammenae sp. nov., isolated from the gut of a camel cricket (Diestrammena coreana).魏斯氏亚种（Weissella diestrammenae sp. nov.），分离自骆驼蟋蟀（Diestrammena coreana）的肠道。
Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2951-2956. doi: 10.1099/ijs.0.047548-0. Epub 2013 Feb 8.
10
Weissella oryzae sp. nov., isolated from fermented rice grains.米曲霉，从发酵米粒中分离得到的新物种。
Int J Syst Evol Microbiol. 2013 Apr;63(Pt 4):1417-1420. doi: 10.1099/ijs.0.043612-0. Epub 2012 Jul 27.
引用本文的文献
1
The and genera: up-to-date taxonomy, ecology, safety, biotechnological, and probiotic potential.[此处原文不完整，缺少具体的属名等关键信息，无法准确完整翻译] 属和 [此处原文不完整，缺少具体的属名等关键信息，无法准确完整翻译] 属：最新分类学、生态学、安全性、生物技术及益生菌潜力。
Front Microbiol. 2023 Dec 11;14:1289937. doi: 10.3389/fmicb.2023.1289937. eCollection 2023.
2
The influence of red pepper powder on the density of Weissella koreensis during kimchi fermentation.红辣椒粉对泡菜发酵过程中韩国魏斯氏菌密度的影响。
Sci Rep. 2015 Oct 26;5:15445. doi: 10.1038/srep15445.
3
Characterization of a minimal pKW2124 replicon from Weissella cibaria KLC140 and its application for the construction of the Weissella expression vector pKUCm1.从 Weissella cibaria KLC140 中鉴定出一个最小的 pKW2124 复制子及其在 Weissella 表达载体 pKUCm1 构建中的应用。
Front Microbiol. 2015 Feb 3;6:35. doi: 10.3389/fmicb.2015.00035. eCollection 2015.
本文引用的文献
1
Intracellular lipid accumulation inhibitory effect of Weissella koreensis OK1-6 isolated from Kimchi on differentiating adipocyte.从泡菜中分离的 Weissella koreensis OK1-6 对分化脂肪细胞的细胞内脂质积累的抑制作用。
J Appl Microbiol. 2012 Sep;113(3):652-8. doi: 10.1111/j.1365-2672.2012.05348.x. Epub 2012 Jul 25.
2
Genome sequence of Weissella confusa LBAE C39-2, isolated from a wheat sourdough.魏斯氏保加利亚乳杆菌 LBAE C39-2 的基因组序列，该菌分离自小麦酸面团。
J Bacteriol. 2012 Mar;194(6):1608-9. doi: 10.1128/JB.06788-11.
3
Complete genome sequence of Weissella koreensis KACC 15510, isolated from kimchi.从泡菜中分离得到的 Weissella koreensis KACC 15510 的全基因组序列。
J Bacteriol. 2011 Oct;193(19):5534. doi: 10.1128/JB.05704-11.
4
Effect of dietary fermented garlic by Weissella koreensis powder on growth performance, blood characteristics, and immune response of growing pigs challenged with Escherichia coli lipopolysaccharide.发酵蒜粉对脂多糖攻毒生长猪生长性能、血液特性和免疫应答的影响
J Anim Sci. 2011 Jul;89(7):2123-31. doi: 10.2527/jas.2010-3186. Epub 2011 Feb 11.
5
Genome Sequence of Weissella cibaria KACC 11862.威氏魏斯氏菌 KACC 11862 基因组序列。
J Bacteriol. 2011 Feb;193(3):797-8. doi: 10.1128/JB.01342-10. Epub 2010 Nov 19.
6
Accessing the SEED genome databases via Web services API: tools for programmers.通过 Web 服务 API 访问 SEED 基因组数据库：面向程序员的工具。
BMC Bioinformatics. 2010 Jun 14;11:319. doi: 10.1186/1471-2105-11-319.
7
Probiotic characteristics of lactic acid bacteria isolated from kimchi.从泡菜中分离的乳酸菌的益生菌特性。
J Appl Microbiol. 2010 Jul;109(1):220-30. doi: 10.1111/j.1365-2672.2009.04648.x. Epub 2009 Dec 7.
8
Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae.比较基因组学揭示了霍乱弧菌大流行期间短期和长期克隆转变的机制。
Proc Natl Acad Sci U S A. 2009 Sep 8;106(36):15442-7. doi: 10.1073/pnas.0907787106. Epub 2009 Aug 31.
9
ARDB--Antibiotic Resistance Genes Database.ARDB——抗生素抗性基因数据库。
Nucleic Acids Res. 2009 Jan;37(Database issue):D443-7. doi: 10.1093/nar/gkn656. Epub 2008 Oct 2.
10
Identifying bacterial genes and endosymbiont DNA with Glimmer.使用Glimmer识别细菌基因和内共生体DNA。
Bioinformatics. 2007 Mar 15;23(6):673-9. doi: 10.1093/bioinformatics/btm009. Epub 2007 Jan 19.
Zotero 插件