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本文引用的文献

1
Development of a method for markerless gene deletion in Pseudomonas putida.开发一种在恶臭假单胞菌中进行无标记基因缺失的方法。
Appl Environ Microbiol. 2011 Aug;77(15):5549-52. doi: 10.1128/AEM.05055-11. Epub 2011 Jun 10.
2
Effect of gcl, glcB and aceA disruption on glyoxylate conversion by Pseudomonas putida JM37.gcl、glcB 和 aceA 缺失对假单胞菌 JM37 转化乙醛酸的影响。
J Microbiol Biotechnol. 2010 Jun;20(6):1006-10. doi: 10.4014/jmb.0912.12005.
3
A complex regulatory network controls aerobic ethanol oxidation in Pseudomonas aeruginosa: indication of four levels of sensor kinases and response regulators.一个复杂的调控网络控制铜绿假单胞菌有氧乙醇氧化:四个感应激酶和反应调节子水平的指示。
Microbiology (Reading). 2010 May;156(Pt 5):1505-1516. doi: 10.1099/mic.0.032847-0. Epub 2010 Jan 21.
4
PQQ-dependent alcohol dehydrogenase (QEDH) of Pseudomonas aeruginosa is involved in catabolism of acyclic terpenes.铜胺依赖型醇脱氢酶(QEDH)参与铜绿假单胞菌中环萜类化合物的分解代谢。
J Basic Microbiol. 2010 Apr;50(2):119-24. doi: 10.1002/jobm.200900178.
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Analysis of the promoter activities of the genes encoding three quinoprotein alcohol dehydrogenases in Pseudomonas putida HK5.
Microbiology (Reading). 2009 Feb;155(Pt 2):594-603. doi: 10.1099/mic.0.021956-0.
6
Sweet silver: a formaldehyde-free silver staining using aldoses as developing agents, with enhanced compatibility with mass spectrometry.甜蜜银染法:一种以醛糖为显影剂的无甲醛银染法,与质谱分析的兼容性增强。
Proteomics. 2008 Dec;8(23-24):4853-61. doi: 10.1002/pmic.200800321.
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Function and transcriptional regulation of the isocitrate lyase in Pseudomonas aeruginosa.铜绿假单胞菌中异柠檬酸裂解酶的功能与转录调控
Arch Microbiol. 2008 Aug;190(2):151-8. doi: 10.1007/s00203-008-0381-7. Epub 2008 Jun 24.
8
Genetic analyses and molecular characterization of the pathways involved in the conversion of 2-phenylethylamine and 2-phenylethanol into phenylacetic acid in Pseudomonas putida U.恶臭假单胞菌U中2-苯乙胺和2-苯乙醇转化为苯乙酸所涉及途径的遗传分析和分子表征
Environ Microbiol. 2008 Feb;10(2):413-32. doi: 10.1111/j.1462-2920.2007.01464.x. Epub 2007 Dec 27.
9
In-gel digestion for mass spectrometric characterization of proteins and proteomes.用于蛋白质和蛋白质组质谱表征的胶内消化。
Nat Protoc. 2006;1(6):2856-60. doi: 10.1038/nprot.2006.468.
10
Dual role of isocitrate lyase 1 in the glyoxylate and methylcitrate cycles in Mycobacterium tuberculosis.异柠檬酸裂解酶1在结核分枝杆菌乙醛酸循环和甲基柠檬酸循环中的双重作用
Mol Microbiol. 2006 Aug;61(4):940-7. doi: 10.1111/j.1365-2958.2006.05297.x.

铜绿假单胞菌的乙二醇代谢。

Ethylene glycol metabolism by Pseudomonas putida.

机构信息

Institute of Technical Biochemistry, University of Stuttgart, Stuttgart, Germany.

出版信息

Appl Environ Microbiol. 2012 Dec;78(24):8531-9. doi: 10.1128/AEM.02062-12. Epub 2012 Sep 28.

DOI:10.1128/AEM.02062-12
PMID:23023748
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3502918/
Abstract

In this study, we investigated the metabolism of ethylene glycol in the Pseudomonas putida strains KT2440 and JM37 by employing growth and bioconversion experiments, directed mutagenesis, and proteome analysis. We found that strain JM37 grew rapidly with ethylene glycol as a sole source of carbon and energy, while strain KT2440 did not grow within 2 days of incubation under the same conditions. However, bioconversion experiments revealed metabolism of ethylene glycol by both strains, with the temporal accumulation of glycolic acid and glyoxylic acid for strain KT2440. This accumulation was further increased by targeted mutagenesis. The key enzymes and specific differences between the two strains were identified by comparative proteomics. In P. putida JM37, tartronate semialdehyde synthase (Gcl), malate synthase (GlcB), and isocitrate lyase (AceA) were found to be induced in the presence of ethylene glycol or glyoxylic acid. Under the same conditions, strain KT2440 showed induction of AceA only. Despite this difference, the two strains were found to use similar periplasmic dehydrogenases for the initial oxidation step of ethylene glycol, namely, the two redundant pyrroloquinoline quinone (PQQ)-dependent enzymes PedE and PedH. From these results we constructed a new pathway for the metabolism of ethylene glycol in P. putida. Furthermore, we conclude that Pseudomonas putida might serve as a useful platform from which to establish a whole-cell biocatalyst for the production of glyoxylic acid from ethylene glycol.

摘要

在这项研究中,我们通过生长和生物转化实验、定向诱变和蛋白质组分析,研究了假单胞菌属 KT2440 和 JM37 菌株中乙二醇的代谢。我们发现,JM37 菌株可以迅速利用乙二醇作为唯一的碳源和能源进行生长,而 KT2440 菌株在相同条件下培养 2 天内不能生长。然而,生物转化实验表明两种菌株都能代谢乙二醇,KT2440 菌株会在一段时间内积累甘醇酸和乙醛酸。通过靶向诱变,这种积累进一步增加。通过比较蛋白质组学,我们确定了两种菌株的关键酶和特定差异。在假单胞菌 JM37 中,发现存在琥珀酸半醛合酶(Gcl)、苹果酸合酶(GlcB)和异柠檬酸裂解酶(AceA),在存在乙二醇或乙醛酸时会被诱导。在相同条件下,KT2440 菌株仅诱导 AceA。尽管存在这种差异,但这两种菌株被发现使用类似的周质脱氢酶来进行乙二醇的初始氧化步骤,即两种冗余的吡咯喹啉醌(PQQ)依赖性酶 PedE 和 PedH。根据这些结果,我们构建了假单胞菌属 KT2440 代谢乙二醇的新途径。此外,我们得出结论,假单胞菌属可能是一种有用的平台,可以从中建立一种用于从乙二醇生产乙醛酸的全细胞生物催化剂。