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本文引用的文献

1
Direct measurements of electric fields in weak OH···π hydrogen bonds.直接测量弱 OH···π 氢键中的电场。
J Am Chem Soc. 2011 Nov 2;133(43):17414-9. doi: 10.1021/ja2069592. Epub 2011 Oct 12.
2
Structure of the indole-benzene dimer revisited.吲哚-苯二聚体结构的再研究。
J Phys Chem A. 2011 Sep 1;115(34):9485-92. doi: 10.1021/jp1119684. Epub 2011 Mar 17.
3
Accurately characterizing the pi-pi interaction energies of indole-benzene complexes.准确刻画吲哚-苯复合物的 pi-pi 相互作用能。
J Phys Chem A. 2010 Mar 18;114(10):3576-82. doi: 10.1021/jp9099495.
4
Sulfur, not too far behind O, N, and C: SH...pi hydrogen bond.硫,仅次于 O、N 和 C:SH…pi 氢键。
J Phys Chem A. 2009 Nov 19;113(46):12774-82. doi: 10.1021/jp907747w.
5
Solvent control of the soft angular potential in hydroxyl-pi hydrogen bonds: inertial orientational dynamics.羟基-π氢键中软角势的溶剂控制:惯性取向动力学
J Phys Chem B. 2009 Oct 8;113(40):13300-7. doi: 10.1021/jp907616x.
6
Stark realities.严峻的现实。
J Phys Chem B. 2009 Mar 12;113(10):2972-83. doi: 10.1021/jp8067393.
7
Vibrational Stark Effects on Carbonyl, Nitrile, and Nitrosyl Compounds Including Heme Ligands, CO, CN, and NO, Studied with Density Functional Theory.运用密度泛函理论研究包括血红素配体、一氧化碳、氰基和一氧化氮在内的羰基、腈基和亚硝酰基化合物的振动斯塔克效应。
J Phys Chem B. 2004 May 20;108(20):6450-7. doi: 10.1021/jp0310697.
8
2D-IR spectroscopy of the sulfhydryl band of cysteines in the hydrophobic core of proteins.蛋白质疏水核心中半胱氨酸巯基带的二维红外光谱。
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9
Nature and physical origin of CH/pi interaction: significant difference from conventional hydrogen bonds.CH/π相互作用的本质与物理起源:与传统氢键的显著差异。
Phys Chem Chem Phys. 2008 May 21;10(19):2584-94. doi: 10.1039/b718656h. Epub 2008 Apr 4.
10
pH-dependent Raman study of pyrrole and its vibrational analysis using DFT calculations.吡咯的pH依赖性拉曼研究及其使用密度泛函理论计算的振动分析。
Spectrochim Acta A Mol Biomol Spectrosc. 2008 Dec 1;71(3):823-9. doi: 10.1016/j.saa.2008.02.032. Epub 2008 Feb 26.

实验量化 X-H···π 氢键中的静电作用。

Experimental quantification of electrostatics in X-H···π hydrogen bonds.

机构信息

Department of Chemistry, Stanford University, Stanford, California 94305-5012, USA.

出版信息

J Am Chem Soc. 2012 Nov 21;134(46):18986-97. doi: 10.1021/ja305575t. Epub 2012 Nov 7.

DOI:10.1021/ja305575t
PMID:23098379
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3511793/
Abstract

Hydrogen bonds are ubiquitous in chemistry and biology. The physical forces that govern hydrogen-bonding interactions have been heavily debated, with much of the discussion focused on the relative contributions of electrostatic vs quantum mechanical effects. In principle, the vibrational Stark effect, the response of a vibrational mode to electric field, can provide an experimental method for parsing such interactions into their electrostatic and nonelectrostatic components. In a previous study we showed that, in the case of relatively weak O-H···π hydrogen bonds, the O-H bond displays a linear response to an electric field, and we exploited this response to demonstrate that the interactions are dominated by electrostatics (Saggu, M.; Levinson, N. M.; Boxer, S. G. J. Am. Chem. Soc.2011, 133, 17414-17419). Here we extend this work to other X-H···π interactions. We find that the response of the X-H vibrational probe to electric field appears to become increasingly nonlinear in the order O-H < N-H < S-H. The observed effects are consistent with differences in atomic polarizabilities of the X-H groups. Nonetheless, we find that the X-H stretching vibrations of the model compounds indole and thiophenol report quantitatively on the electric fields they experience when complexed with aromatic hydrogen-bond acceptors. These measurements can be used to estimate the electrostatic binding energies of the interactions, which are found to agree closely with the results of energy calculations. Taken together, these results highlight that with careful calibration vibrational probes can provide direct measurements of the electrostatic components of hydrogen bonds.

摘要

氢键在化学和生物学中无处不在。支配氢键相互作用的物理力一直备受争议,其中大部分讨论都集中在静电与量子力学效应的相对贡献上。原则上,振动斯塔克效应(振动模式对电场的响应)可以为将相互作用分解为静电和非静电分量提供一种实验方法。在之前的一项研究中,我们表明,在相对较弱的 O-H···π氢键的情况下,O-H 键对电场呈线性响应,我们利用这种响应证明了相互作用主要由静电(Saggu,M.;Levinson,N. M.;Boxer,S. G. J. Am. Chem. Soc.2011,133,17414-17419)主导。在这里,我们将这项工作扩展到其他 X-H···π 相互作用。我们发现,X-H 振动探针对电场的响应似乎按 O-H < N-H < S-H 的顺序变得越来越非线性。观察到的效应与 X-H 基团原子极化率的差异一致。尽管如此,我们发现吲哚和苯硫酚等模型化合物的 X-H 伸缩振动定量报告了它们与芳香氢键受体络合时所经历的电场。这些测量可用于估计相互作用的静电结合能,结果与能量计算的结果非常吻合。综上所述,这些结果表明,通过仔细校准,振动探针可以提供氢键静电分量的直接测量。