Basic Science Research Institute, Kyonggi University, San 94-6, Iui-dong, Yeongtong-gu, Suwon-si, 443-760, Republic of Korea.
Curr Microbiol. 2013 Mar;66(3):300-5. doi: 10.1007/s00284-012-0270-9. Epub 2012 Nov 30.
A Gram-negative, aerobic, short-rod-shaped, non-motile bacterium designated Rs7(T), was isolated from peat soil collected from Russia and was characterized to determine its taxonomic position. 16S rRNA gene sequence analysis revealed that the strain Rs7(T) belongs to the class Betaproteobacteria. The highest degree of sequence similarities were determined to be with Burkholderia tropica Ppe8(T) (98.4 %), Burkholderia unamae MTI-641(T) (97.8 %), Burkholderia bannensis E25(T) (97.7 %), Burkholderia heleia SA41(T) (97.0 %), and Burkholderia sacchari IPT101(T) (97.0 %). Chemotaxonomic data revealed that the strain Rs7(T) possesses ubiquinone Q-8. The polar lipid profile of strain Rs7(T) contained phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, and an unknown amino phospholipid. The predominant fatty acids were C(16:0), C(19:0) cyclo ω8c, and C(17:0) cyclo, all of which corroborated the assignment of the strain to the genus Burkholderia. The DNA G+C content was 63.2 mol%. DNA-DNA hybridization experiments showed less than 37.8 % DNA relatedness with closely related type strains, thus confirming separate species status. The results of physiological and biochemical tests allowed phenotypic differentiation of strain Rs7(T) from the members of the genus Burkholderia. Based on these data, Rs7(T) (=KEMC 7302-068(T) = JCM 18069(T)) should be classified as the type strain for a novel Burkholderia species, for which the name Burkholderia humi sp. nov. is proposed.
一株革兰氏阴性、需氧、短杆状、非运动性细菌 Rs7(T) 被分离自俄罗斯采集的泥炭土,对其进行了特征描述以确定其分类地位。16S rRNA 基因序列分析表明,该菌株 Rs7(T) 属于β变形菌纲。与 Burkholderia tropica Ppe8(T) (98.4%)、Burkholderia unamae MTI-641(T) (97.8%)、Burkholderia bannensis E25(T) (97.7%)、Burkholderia heleia SA41(T) (97.0%)和 Burkholderia sacchari IPT101(T) (97.0%)的相似度最高。化学分类数据表明,该菌株 Rs7(T) 含有泛醌 Q-8。菌株 Rs7(T) 的极性脂谱含有磷脂酰乙醇胺、双磷脂酰甘油、磷脂酰甘油和一种未知的氨基磷脂。主要脂肪酸为 C(16:0)、C(19:0) 环 ω8c 和 C(17:0) 环,所有这些都证实了该菌株属于 Burkholderia 属。DNA G+C 含量为 63.2mol%。DNA-DNA 杂交实验表明,与亲缘关系密切的模式菌株的 DNA 相关性小于 37.8%,从而证实了其具有独立的种的地位。生理生化测试的结果允许从 Burkholderia 属的成员中区分出菌株 Rs7(T)。基于这些数据,Rs7(T) (=KEMC 7302-068(T)=JCM 18069(T)) 应被归类为一个新的 Burkholderia 种的模式菌株,建议将其命名为 Burkholderia humi sp. nov.。