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本文引用的文献

1
Rapid and simple isolation of pure photosystem II core and reaction center particles from spinach.快速简便地从菠菜中分离纯光系统 II 核心和反应中心颗粒。
Photosynth Res. 1991 Jun;28(3):149-53. doi: 10.1007/BF00054128.
2
Excitation energy transfer and charge separation in the isolated Photosystem II reaction center.激发态能量转移和电荷分离在分离的光系统 II 反应中心。
Photosynth Res. 1996 May;48(1-2):83-97. doi: 10.1007/BF00040999.
3
High throughput engineering to revitalize a vestigial electron transfer pathway in bacterial photosynthetic reaction centers.高通量工程改造细菌光合反应中心中的一条退化电子转移途径。
J Biol Chem. 2012 Mar 9;287(11):8507-14. doi: 10.1074/jbc.M111.326447. Epub 2012 Jan 14.
4
Optical properties, excitation energy and primary charge transfer in photosystem II: theory meets experiment.光合作用系统 II 的光学性质、激发能和初始电荷转移:理论与实验的交汇。
J Photochem Photobiol B. 2011 Jul-Aug;104(1-2):126-41. doi: 10.1016/j.jphotobiol.2011.03.016. Epub 2011 Apr 7.
5
Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å.氧气产生光合作用 II 系统在 1.9 Å 分辨率下的晶体结构。
Nature. 2011 May 5;473(7345):55-60. doi: 10.1038/nature09913. Epub 2011 Apr 17.
6
Multiple charge-separation pathways in photosystem II: modeling of transient absorption kinetics.光系统 II 中的多种电荷分离途径:瞬态吸收动力学的建模。
Chemphyschem. 2011 Feb 25;12(3):681-8. doi: 10.1002/cphc.201000830. Epub 2011 Feb 14.
7
Energy-transfer and charge-separation pathways in the reaction center of photosystem II revealed by coherent two-dimensional optical spectroscopy.通过相干二维光学光谱学揭示光合作用系统 II 反应中心的能量转移和电荷分离途径。
J Chem Phys. 2010 Nov 14;133(18):184501. doi: 10.1063/1.3493580.
8
Two different charge separation pathways in photosystem II.两种不同的光系统 II 电荷分离途径。
Biochemistry. 2010 May 25;49(20):4300-7. doi: 10.1021/bi1003926.
9
Primary photophysical processes in photosystem II: bridging the gap between crystal structure and optical spectra.光合作用系统 II 中的主要光物理过程:连接晶体结构与光学光谱之间的桥梁。
Chemphyschem. 2010 Apr 26;11(6):1141-53. doi: 10.1002/cphc.200900932.
10
Spectroscopic properties of reaction center pigments in photosystem II core complexes: revision of the multimer model.光系统II核心复合物中反应中心色素的光谱特性:多聚体模型的修订
Biophys J. 2008 Jul;95(1):105-19. doi: 10.1529/biophysj.107.123935. Epub 2008 Mar 13.

模拟光合作用 II 反应中心的二维电子光谱。

Simulations of the two-dimensional electronic spectroscopy of the photosystem II reaction center.

机构信息

Department of Physics and Biophysics, University of Michigan, Ann Arbor, Michigan 48109-1040, USA.

出版信息

J Phys Chem A. 2013 Jan 10;117(1):34-41. doi: 10.1021/jp3081707. Epub 2012 Dec 20.

DOI:10.1021/jp3081707
PMID:23210463
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3702820/
Abstract

We report simulations of the two-dimensional electronic spectroscopy of the Q(y) band of the D1-D2-Cyt b559 photosystem II reaction center at 77 K. We base the simulations on an existing Hamiltonian that was derived by simultaneous fitting to a wide range of linear spectroscopic measurements and described within modified Redfield theory. The model obtains reasonable agreement with most aspects of the two-dimensional spectra, including the overall peak shapes and excited state absorption features. It does not reproduce the rapid equilibration from high energy to low energy excitonic states evident by a strong cross-peak below the diagonal. We explore modifications to the model to incorporate new structural data and improve agreement with the two-dimensional spectra. We find that strengthening the system-bath coupling and lowering the degree of disorder significantly improves agreement with the cross-peak feature, while lessening agreement with the relative diagonal/antidiagonal width of the 2D spectra. We conclude that two-dimensional electronic spectroscopy provides a sensitive test of excitonic models of the photosystem II reaction center and discuss avenues for further refinement of such models.

摘要

我们报告了在 77 K 下 D1-D2-Cyt b559 光系统 II 反应中心 Q(y) 带的二维电子光谱的模拟。我们的模拟基于一个现有的哈密顿量,该哈密顿量是通过同时拟合广泛的线性光谱测量值并在修正的 Redfield 理论中描述而得出的。该模型与二维光谱的大多数方面,包括整体峰值形状和激发态吸收特征,都取得了合理的一致。然而,它并没有再现从高能到低能激子态的快速平衡,这一点可以通过对角线下方的强交叉峰明显看出。我们探索了对模型的修改,以纳入新的结构数据并改善与二维光谱的一致性。我们发现,增强系统-浴耦合并降低无序度显著改善了与交叉峰特征的一致性,同时降低了与二维光谱的相对对角线/反对角线宽度的一致性。我们得出结论,二维电子光谱为光系统 II 反应中心的激子模型提供了一个敏感的测试,并讨论了进一步改进此类模型的途径。