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利用全基因组关联研究的荟萃分析来细化全基因组连锁区间,确定影响人格维度的基因座。

Refining genome-wide linkage intervals using a meta-analysis of genome-wide association studies identifies loci influencing personality dimensions.

机构信息

Unit of Genetic Epidemiology, Department of Epidemiology and Biostatistics, Erasmus University Medical Center, Rotterdam, The Netherlands.

出版信息

Eur J Hum Genet. 2013 Aug;21(8):876-82. doi: 10.1038/ejhg.2012.263. Epub 2012 Dec 5.

Abstract

Personality traits are complex phenotypes related to psychosomatic health. Individually, various gene finding methods have not achieved much success in finding genetic variants associated with personality traits. We performed a meta-analysis of four genome-wide linkage scans (N=6149 subjects) of five basic personality traits assessed with the NEO Five-Factor Inventory. We compared the significant regions from the meta-analysis of linkage scans with the results of a meta-analysis of genome-wide association studies (GWAS) (N∼17 000). We found significant evidence of linkage of neuroticism to chromosome 3p14 (rs1490265, LOD=4.67) and to chromosome 19q13 (rs628604, LOD=3.55); of extraversion to 14q32 (ATGG002, LOD=3.3); and of agreeableness to 3p25 (rs709160, LOD=3.67) and to two adjacent regions on chromosome 15, including 15q13 (rs970408, LOD=4.07) and 15q14 (rs1055356, LOD=3.52) in the individual scans. In the meta-analysis, we found strong evidence of linkage of extraversion to 4q34, 9q34, 10q24 and 11q22, openness to 2p25, 3q26, 9p21, 11q24, 15q26 and 19q13 and agreeableness to 4q34 and 19p13. Significant evidence of association in the GWAS was detected between openness and rs677035 at 11q24 (P-value=2.6 × 10(-06), KCNJ1). The findings of our linkage meta-analysis and those of the GWAS suggest that 11q24 is a susceptible locus for openness, with KCNJ1 as the possible candidate gene.

摘要

人格特质是与身心健康相关的复杂表型。单独来看,各种基因发现方法在发现与人格特质相关的遗传变异方面并没有取得太大成功。我们对五个基本人格特质(使用 NEO 五因素量表评估)的四项全基因组连锁扫描(N=6149 个受试者)进行了荟萃分析。我们将连锁扫描荟萃分析的显著区域与全基因组关联研究(GWAS)的荟萃分析结果(N∼17000)进行了比较。我们发现神经质与染色体 3p14(rs1490265,LOD=4.67)和染色体 19q13(rs628604,LOD=3.55)之间存在显著的连锁证据;外向性与 14q32(ATGG002,LOD=3.3)之间存在显著的连锁证据;宜人性与 3p25(rs709160,LOD=3.67)和染色体 15 上两个相邻区域之间存在显著的连锁证据,包括 15q13(rs970408,LOD=4.07)和 15q14(rs1055356,LOD=3.52)在个体扫描中。在荟萃分析中,我们发现外向性与 4q34、9q34、10q24 和 11q22,开放性与 2p25、3q26、9p21、11q24、15q26 和 19q13,宜人性与 4q34 和 19p13 之间存在强烈的连锁证据。在 GWAS 中,在 11q24 处发现了开放性与 rs677035 之间存在显著的关联(P 值=2.6×10(-06),KCNJ1)。我们的连锁荟萃分析和 GWAS 的发现表明,11q24 是开放性的易感位点,KCNJ1 可能是候选基因。

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