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描述从航天器组装洁净室环境中分离到的火烈鸟球菌属的一个新种。

Description of Tersicoccus phoenicis gen. nov., sp. nov. isolated from spacecraft assembly clean room environments.

机构信息

Biotechnology and Planetary Protection Group, Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109, USA.

Institute for Microbiology and Archaea Center, University of Regensburg, Universitaetsstr. 31, 93053 Regensburg, Germany.

出版信息

Int J Syst Evol Microbiol. 2013 Jul;63(Pt 7):2463-2471. doi: 10.1099/ijs.0.047134-0. Epub 2012 Dec 7.

Abstract

Two strains of aerobic, non-motile, Gram-reaction-positive cocci were independently isolated from geographically distinct spacecraft assembly clean room facilities (Kennedy Space Center, Florida, USA and Centre Spatial Guyanais, Kourou, French Guiana). A polyphasic study was carried out to delineate the taxonomic identity of these two isolates (1P05MA(T) and KO_PS43). The 16S rRNA gene sequences exhibited a high similarity when compared to each other (100 %) and lower than 96.7 % relatedness with Arthrobacter crystallopoietes ATCC 15481(T), Arthrobacter luteolus ATCC BAA-272(T), Arthrobacter tumbae DSM 16406(T) and Arthrobacter subterraneus DSM 17585(T). In contrast with previously described Arthrobacter species, the novel isolates maintained their coccidal morphology throughout their growth and did not exhibit the rod-coccus life cycle typically observed in nearly all Arthrobacter species, except A. agilis. The distinct taxonomic identity of the novel isolates was confirmed based on their unique cell-wall peptidoglycan type (A.11.20; Lys-Ser-Ala2) and polar lipid profile (presence of phosphatidylglycerol, diphosphatidylglycerol, phosphatidylinositol, an unknown phospholipid and two unknown glycolipids). The G+C content of the genomic DNA was 70.6 mol%. The novel strains revealed MK-9(H2) and MK-8(H2) as dominant menaquinones and exhibited fatty acid profiles consisting of major amounts of anteiso-C15 : 0 and anteiso-C17 : 0 and moderate amounts of iso-C15 : 0 discriminating them again from closely related Arthrobacter species. Based on these observations, the authors propose that strains 1P05MA(T) and KO_PS43 be assigned into a separate genus Tersicoccus gen. nov. For this new taxon, comprising strains 1P05MA(T) and KO_PS43, we propose the name Tersicoccus phoenicis gen. nov., sp. nov. (the type species of Tersicoccus), represented by the type strain Tersicoccus phoenicis 1P05MA(T) ( = NRRL B-59547(T) = DSM 30849(T)).

摘要

两株需氧、非运动、革兰氏阳性球菌分别从地理位置不同的航天器装配清洁室设施(美国佛罗里达州肯尼迪航天中心和法属圭亚那的圭亚那太空中心)中独立分离出来。进行了多相研究以描绘这两个分离物(1P05MA(T)和 KO_PS43)的分类学身份。16S rRNA 基因序列彼此之间表现出高度相似性(100%),与 Arthrobacter crystallopoietes ATCC 15481(T)、Arthrobacter luteolus ATCC BAA-272(T)、Arthrobacter tumbae DSM 16406(T)和 Arthrobacter subterraneus DSM 17585(T)的相关性低于 96.7%。与以前描述的 Arthrobacter 物种不同,新型分离物在整个生长过程中保持球菌形态,并且没有表现出几乎所有 Arthrobacter 物种中通常观察到的杆状-球菌生命周期,除了 A. agilis。新型分离物的独特分类学身份基于其独特的细胞壁肽聚糖类型(A.11.20;Lys-Ser-Ala2)和极性脂谱(存在磷脂酰甘油、双磷脂酰甘油、磷脂酰肌醇、一种未知的磷脂和两种未知的糖脂)得到确认。基因组 DNA 的 G+C 含量为 70.6 mol%。新型菌株显示 MK-9(H2)和 MK-8(H2)为优势menaquinones,并表现出由大量的 anteiso-C15:0 和 anteiso-C17:0 和适量的 iso-C15:0 组成的脂肪酸谱,这再次将它们与密切相关的 Arthrobacter 物种区分开来。基于这些观察结果,作者建议将菌株 1P05MA(T)和 KO_PS43 分配到一个单独的属 Tersicoccus gen. nov. 对于这个新的分类群,包括菌株 1P05MA(T)和 KO_PS43,我们建议使用 Tersicoccus phoenicis gen. nov.,sp. nov.(Tersicoccus)的名称,由模式菌株 Tersicoccus phoenicis 1P05MA(T)(=NRRL B-59547(T)=DSM 30849(T))代表。

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