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链球菌属的咽峡炎链球菌群分类及咽峡炎链球菌亚种赖氏亚种和星座链球菌亚种 viborgensis 亚种的描述。

Taxonomy of the Anginosus group of the genus Streptococcus and description of Streptococcus anginosus subsp. whileyi subsp. nov. and Streptococcus constellatus subsp. viborgensis subsp. nov.

机构信息

Department of Biomedicine, Faculty of Health Sciences, Aarhus University, Aarhus, Denmark.

Department of Pediatric Dentistry, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki, Japan.

出版信息

Int J Syst Evol Microbiol. 2013 Jul;63(Pt 7):2506-2519. doi: 10.1099/ijs.0.043232-0. Epub 2012 Dec 7.

Abstract

The Anginosus group of the genus Streptococcus has been the subject of much taxonomic confusion, which has hampered the full appreciation of its clinical significance. The purpose of this study was to critically re-examine the taxonomy of the Anginosus group, with special attention to β-haemolytic, Lancefield group C strains, using multilocus sequence analysis (MLSA) combined with 16S rRNA gene sequence and phenotypic analyses. Phylogenetic analysis of concatenated sequences of seven housekeeping genes previously used for examination of viridans streptococci distinguished seven distinct and coherent clusters in the Anginosus group. Analyses of 16S rRNA gene sequences and phenotypic characters supported the MLSA clustering and currently recognized taxa of the Anginosus group. Single gene analyses showed considerable allele sharing between species, thereby invalidating identification based on single-locus sequencing. Two novel clusters of β-haemolytic, Lancefield group C strains within the Streptococcus constellatus and Streptococcus anginosus species and isolated from patients with sore throat showed sufficient phylogenetic distances from other clusters to warrant status as novel subspecies. The novel cluster within S. anginosus was identified as the previously recognized DNA homology cluster, DNA group 2. The names S. anginosus subsp. whileyi subsp. nov. (type strain CCUG 39159(T) = DSM 25818(T) = SK1267(T)) and S. constellatus subsp. viborgensis subsp. nov. (type strain SK1359(T) = CCUG 62387(T) = DSM 25819(T)) are proposed.

摘要

该属的咽峡炎组链球菌一直是分类学上的混淆,这阻碍了充分认识其临床意义。本研究的目的是重新审视咽峡炎组的分类学,特别关注β-溶血性,兰斯菲尔德组 C 株,采用多位点序列分析(MLSA)结合 16S rRNA 基因序列和表型分析。先前用于检查草绿色链球菌的 7 个看家基因的串联序列的系统发育分析,将咽峡炎组分为 7 个独特的、一致的群。16S rRNA 基因序列和表型特征分析支持 MLSA 聚类和目前公认的咽峡炎组分类群。单基因分析表明,种间存在相当大的等位基因共享,从而使基于单基因测序的鉴定无效。两种新型的β-溶血性,兰斯菲尔德组 C 株在星座链球菌和咽峡炎链球菌种内分离株中,从咽痛患者中分离出来,与其他聚类具有足够的系统发育距离,值得作为新亚种。在 S. anginosus 中的新型聚类被鉴定为先前被认可的 DNA 同源聚类,DNA 组 2。新的 S. anginosus 亚种的名称是 whileyi 亚种。nov.(模式株 CCUG 39159(T)=DSM 25818(T)=SK1267(T))和 S. constellatus 亚种。 viborgensis 亚种。nov.(模式株 SK1359(T)=CCUG 62387(T)=DSM 25819(T))被提议。

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