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用于鉴别咽峡炎链球菌群成员的基因分型和表型方法的评估

Evaluation of genotypic and phenotypic methods for differentiation of the members of the Anginosus group streptococci.

作者信息

Summanen P H, Rowlinson M-C, Wooton J, Finegold S M

机构信息

Research Service, Veterans Affair Medical Center West Los Angeles, Los Angeles, CA, USA.

出版信息

Eur J Clin Microbiol Infect Dis. 2009 Sep;28(9):1123-8. doi: 10.1007/s10096-009-0758-9. Epub 2009 Jun 4.

Abstract

The terminology and classification of the Anginosus group streptococci has been inconsistent. We tested the utility of 16S rRNA gene and tuf gene sequencing and conventional biochemical tests for the reliable differentiation of the Anginosus group streptococci. Biochemical testing included Rapid ID 32 Strep, API Strep, Fluo-Card Milleri, Wee-tabs, and Lancefield antigen typing. Altogether, 61 Anginosus group isolates from skin and soft tissue infections and four reference strains were included. Our results showed a good agreement between 16S rRNA gene and tuf gene sequencing. Using the full sequence was less discriminatory than using the first part of the 16S rRNA gene. The three species could not be separated with the API 20 Strep test. Streptococcus intermedius could be differentiated from the other two species by beta-galactosidase (ONPG) and beta-N-acetyl-glucosaminidase reactions. Rapid ID 32 Strep beta-glucosidase reaction was useful in separating S. anginosus strains from S. constellatus. In conclusion, both 16S rRNA gene and tuf gene sequencing can be used for the reliable identification of the Anginosus group streptococci. S. intermedius can be readily differentiated from the other two species by phenotypic tests; however, 16S rRNA gene or tuf gene sequencing may be needed for separating some strains of S. constellatus from S. anginosus.

摘要

咽峡炎链球菌群的术语和分类一直不一致。我们测试了16S rRNA基因和tuf基因测序以及传统生化试验在可靠区分咽峡炎链球菌群方面的效用。生化试验包括快速鉴定32 Strep、API Strep、荧光卡米氏链球菌、Wee-tabs和兰斯菲尔德抗原分型。总共纳入了61株来自皮肤和软组织感染的咽峡炎链球菌群分离株以及4株参考菌株。我们的结果显示16S rRNA基因和tuf基因测序之间具有良好的一致性。使用完整序列的鉴别力不如使用16S rRNA基因的第一部分。这三个菌种不能用API 20 Strep试验区分。中间链球菌可通过β-半乳糖苷酶(ONPG)和β-N-乙酰氨基葡萄糖苷酶反应与其他两个菌种区分开来。快速鉴定32 Strepβ-葡萄糖苷酶反应有助于将咽峡炎链球菌菌株与星座链球菌区分开来。总之,16S rRNA基因和tuf基因测序均可用于可靠鉴定咽峡炎链球菌群。中间链球菌可通过表型试验轻松与其他两个菌种区分开来;然而,可能需要16S rRNA基因或tuf基因测序来区分一些星座链球菌菌株和咽峡炎链球菌菌株。

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