Biomedical Informatics Group (IBIME-ITACA), Universitat Politècnica de València, Valencia, Spain.
NMR Biomed. 2013 May;26(5):578-92. doi: 10.1002/nbm.2895. Epub 2012 Dec 12.
The current challenge in automatic brain tumor classification based on MRS is the improvement of the robustness of the classification models that explicitly account for the probable breach of the independent and identically distributed conditions in the MRS data points. To contribute to this purpose, a new algorithm for the extraction of discriminant MRS features of brain tumors based on a functional approach is presented. Functional data analysis based on region segmentation (RSFDA) is based on the functional data analysis formalism using nonuniformly distributed B splines according to spectral regions that are highly correlated. An exhaustive characterization of the method is presented in this work using controlled and real scenarios. The performance of RSFDA was compared with other widely used feature extraction methods. In all simulated conditions, RSFDA was proven to be stable with respect to the number of variables selected and with respect to the classification performance against noise and baseline artifacts. Furthermore, with real multicenter datasets classification, RSFDA and peak integration (PI) obtained better performance than the other feature extraction methods used for comparison. Other advantages of the method proposed are its usefulness in selecting the optimal number of features for classification and its simplified functional representation of the spectra, which contributes to highlight the discriminative regions of the MR spectrum for each classification task.
基于 MRS 的自动脑肿瘤分类目前面临的挑战是提高分类模型的稳健性,这些模型明确考虑了 MRS 数据点中可能违反独立同分布条件的情况。为了实现这一目的,提出了一种基于功能方法提取脑肿瘤判别性 MRS 特征的新算法。基于区域分割 (RSFDA) 的功能数据分析是基于使用非均匀分布 B 样条的功能数据分析形式,根据高度相关的光谱区域进行分布。在这项工作中,使用受控和真实场景对该方法进行了全面的描述。将 RSFDA 的性能与其他广泛使用的特征提取方法进行了比较。在所有模拟条件下,RSFDA 都被证明在选择的变量数量以及针对噪声和基线伪影的分类性能方面是稳定的。此外,在使用真实的多中心数据集进行分类时,RSFDA 和峰积分 (PI) 获得的性能优于用于比较的其他特征提取方法。该方法的其他优点包括它在选择分类的最佳特征数量方面的有用性,以及它对光谱的简化功能表示,这有助于突出每个分类任务的 MR 光谱的判别区域。