Department of Life Science, Graduate School of Kyonggi University, Suwon, Gyeonggi-Do, 443-760, South Korea.
Curr Microbiol. 2014 Jan;68(1):88-95. doi: 10.1007/s00284-013-0443-1. Epub 2013 Aug 31.
Using a new culture method for unculturable soil bacteria, we discovered a novel species, NHI-38(T), from the forest soil of Kyonggi University campus, South Korea. It was a Gram-positive, rod-shaped, and endospore-forming bacterial strain. It grew over a wide pH range (6.5-9.5), with an optimum range of pH 7-9, and in a wide range of temperatures (15-60 °C), with an optimum range of 35-45 °C. Growth was possible at 0-2 % NaCl concentration, and the optimal range was between 0.5 and 1.5 % NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed that this new species clustered within the genus Bacillus; it was closely related to "Bacillus abyssalis" SCSIO 15042(T) (98.86 %), B. methanolicus NCIMB 13113(T) (95.97 %), B. vietnamensis 15-1(T) (95.8 %), B. seohaeanensis BH724(T) (95.5 %), B. timonensis MM10403188(T) (95.33 %), and B. subtilis subsp. subtilis NCIB 3610(T) (94.87 %). The main fatty acid components of this bacterium were iso-C15:0 (35.92 %), summed feature 3 (C16:1ω7c/C16:1ω6c; 16.92 %), and anteiso-C15:0 (14.19 %). The predominant quinone in this bacterial strain was MK-7. The polar lipid profile primarily comprised phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol. The genomic DNA G+C composition of the isolate was 40.7 mol%. The DNA-DNA hybridization results indicated that this strain was distinct from other Bacillus species, the degree of similarity being 50 % with "B. abyssalis", 56 % with B. methanolicus, 47 % with B. vietnamensis, 43 % with B. seohaeanensis, 46 % with B. timonensis, and 32 % with B. subtilis. Based on our results, we regard strain NHI-38(T) as a novel member of the Bacillus genus, and we propose the name Bacillus thaonhiensis (=KACC 17216(T) = KEMB 9005-019(T) = JCM 18863(T)).
使用一种新的培养不可培养土壤细菌的方法,我们从韩国京畿大学校园的森林土壤中发现了一个新的物种,NHI-38(T)。它是革兰氏阳性、杆状、产芽孢的细菌菌株。它在较宽的 pH 范围(6.5-9.5)内生长,最适 pH 范围为 7-9,在较宽的温度范围(15-60°C)内生长,最适温度范围为 35-45°C。在 0-2%NaCl 浓度下可以生长,最佳浓度范围在 0.5 和 1.5%NaCl 之间。基于 16S rRNA 基因序列的系统发育分析表明,这个新物种属于芽孢杆菌属;它与“Bacillus abyssalis”SCSIO 15042(T)(98.86%)、B. methanolicus NCIMB 13113(T)(95.97%)、B. vietnamensis 15-1(T)(95.8%)、B. seohaeanensis BH724(T)(95.5%)、B. timonensis MM10403188(T)(95.33%)和 B. subtilis subsp. subtilis NCIB 3610(T)(94.87%)最为接近。该菌的主要脂肪酸成分为 iso-C15:0(35.92%)、summed feature 3(C16:1ω7c/C16:1ω6c;16.92%)和 anteiso-C15:0(14.19%)。该菌的主要醌为 MK-7。极性脂主要由磷脂酰乙醇胺、磷脂酰甘油和双磷脂酰甘油组成。该分离株的基因组 DNA G+C 含量为 40.7mol%。DNA-DNA 杂交结果表明,该菌株与其他芽孢杆菌属物种明显不同,与“B. abyssalis”的相似度为 50%,与 B. methanolicus 的相似度为 56%,与 B. vietnamensis 的相似度为 47%,与 B. seohaeanensis 的相似度为 43%,与 B. timonensis 的相似度为 46%,与 B. subtilis 的相似度为 32%。基于我们的结果,我们认为菌株 NHI-38(T)是芽孢杆菌属的一个新成员,我们提出将其命名为 Thaonhiensis 芽孢杆菌(=KACC 17216(T) = KEMB 9005-019(T) = JCM 18863(T))。