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利用数字全息显微镜对多个红细胞进行自动分割。

Automated segmentation of multiple red blood cells with digital holographic microscopy.

机构信息

Chosun University, School of Computer Engineering, 375 Seosuk-dong, Dong-gu, Gwangju, 501-759 Republic of Korea.

出版信息

J Biomed Opt. 2013 Feb;18(2):26006. doi: 10.1117/1.JBO.18.2.026006.

DOI:10.1117/1.JBO.18.2.026006
PMID:23370481
Abstract

We present a method to automatically segment red blood cells (RBCs) visualized by digital holographic microscopy (DHM), which is based on the marker-controlled watershed algorithm. Quantitative phase images of RBCs can be obtained by using off-axis DHM along to provide some important information about each RBC, including size, shape, volume, hemoglobin content, etc. The most important process of segmentation based on marker-controlled watershed is to perform an accurate localization of internal and external markers. Here, we first obtain the binary image via Otsu algorithm. Then, we apply morphological operations to the binary image to get the internal markers. We then apply the distance transform algorithm combined with the watershed algorithm to generate external markers based on internal markers. Finally, combining the internal and external markers, we modify the original gradient image and apply the watershed algorithm. By appropriately identifying the internal and external markers, the problems of oversegmentation and undersegmentation are avoided. Furthermore, the internal and external parts of the RBCs phase image can also be segmented by using the marker-controlled watershed combined with our method, which can identify the internal and external markers appropriately. Our experimental results show that the proposed method achieves good performance in terms of segmenting RBCs and could thus be helpful when combined with an automated classification of RBCs.

摘要

我们提出了一种基于标记控制分水岭算法的自动分割数字全息显微镜(DHM)可视化红细胞(RBC)的方法。通过沿轴外 DHM 可以获得 RBC 的定量相位图像,这为每个 RBC 提供了一些重要信息,包括大小、形状、体积、血红蛋白含量等。基于标记控制分水岭的分割最重要的过程是对内、外部标记进行准确的定位。在这里,我们首先通过 Otsu 算法获得二值图像。然后,我们对二值图像进行形态学操作,以获得内部标记。然后,我们结合距离变换算法和分水岭算法,根据内部标记生成外部标记。最后,结合内部和外部标记,我们修改原始梯度图像并应用分水岭算法。通过适当识别内部和外部标记,可以避免过分割和欠分割的问题。此外,还可以使用标记控制分水岭和我们的方法对 RBC 相位图像的内部和外部部分进行分割,从而可以适当识别内部和外部标记。我们的实验结果表明,该方法在分割 RBC 方面具有良好的性能,因此在与 RBC 的自动分类相结合时可能会有所帮助。

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