Laboratory of Bioecology and Crustacean Systematics, Program in Comparative Biology, Department of Biology, Faculty of Philosophy, Science and Letters of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.
PLoS One. 2013;8(1):e54698. doi: 10.1371/journal.pone.0054698. Epub 2013 Jan 31.
Macrobrachium olfersii is an amphidromous freshwater prawn, widespread along the eastern coasts of the Americas. This species shows great morphological modifications during ontogenesis, and several studies have verified the existence of a wide intraspecific variation. Because of this condition, the species is often misidentified, and several synonyms have been documented. To elucidate these aspects, individuals of M. olfersii from different populations along its range of distribution were investigated. The taxonomic limit was established, and the degree of genetic variability of this species was described. We extracted DNA from 53 specimens of M. olfersii, M. americanum, M. digueti and M. faustinum, which resulted in 84 new sequences (22 of 16S mtDNA, 45 of Cythocrome Oxidase I (COI) mtDNA, and 17 of Histone (H3) nDNA). Sequences of three genes (single and concatenated) from these species were used in the Maximum Likelihood and Bayesian Inference phylogenetic analyses and COI sequences from M. olfersii were used in population analysis. The genetic variation was evaluated through the alignment of 554 bp from the 16S, 638 bp from the COI, and 338 bp from the H3. The rates of genetic divergence among populations were lower at the intraspecific level. This was confirmed by the haplotype net, which showed a continuous gene flow among populations. Although a wide distribution and high morphological intraspecific variation often suggest the existence of more than one species, genetic similarity of Caribbean and Brazilian populations of M. olfersii supported them as a single species.
罗氏沼虾是一种洄游性淡水虾,广泛分布于美洲东海岸。该物种在个体发育过程中表现出很大的形态变化,并且已经有多项研究证实了其存在广泛的种内变异。由于这种情况,该物种经常被错误识别,并且已经记录了几个同义词。为了阐明这些方面,对分布范围内不同种群的罗氏沼虾个体进行了研究。确定了分类学界限,并描述了该物种的遗传变异性程度。我们从罗氏沼虾的 53 个个体中提取了 DNA,这些个体来自其分布范围的不同种群,结果得到了 84 个新序列(22 个 16S mtDNA、45 个细胞色素氧化酶 I(COI)mtDNA 和 17 个组蛋白(H3)nDNA)。来自这些物种的三个基因(单基因和串联基因)的序列被用于最大似然法和贝叶斯推断系统发育分析,以及罗氏沼虾的 COI 序列被用于种群分析。通过对 16S 的 554bp、COI 的 638bp 和 H3 的 338bp 的比对来评估遗传变异。种内水平的种群间遗传分化率较低。这一点通过单倍型网络得到了证实,该网络显示了种群之间的连续基因流动。尽管广泛的分布和高度的形态种内变异通常表明存在不止一个物种,但加勒比和巴西罗氏沼虾种群的遗传相似性支持它们是一个单一的物种。