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白蛉转录组的特征分析。

The characterization of the Phlebotomus papatasi transcriptome.

机构信息

Department of Biological Sciences, Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN 46556, USA.

出版信息

Insect Mol Biol. 2013 Apr;22(2):211-32. doi: 10.1111/imb.12015. Epub 2013 Feb 7.

Abstract

As important vectors of human disease, phlebotomine sand flies are of global significance to human health, transmitting several emerging and re-emerging infectious diseases. The most devastating of the sand fly transmitted infections are the leishmaniases, causing significant mortality and morbidity in both the Old and New World. Here we present the first global transcriptome analysis of the Old World vector of cutaneous leishmaniasis, Phlebotomus papatasi (Scopoli) and compare this transcriptome to that of the New World vector of visceral leishmaniasis, Lutzomyia longipalpis. A normalized cDNA library was constructed using pooled mRNA from Phlebotomus papatasi larvae, pupae, adult males and females fed sugar, blood, or blood infected with Leishmania major. A total of 47 615 generated sequences was cleaned and assembled into 17 120 unique transcripts. Of the assembled sequences, 50% (8837 sequences) were classified using Gene Ontology (GO) terms. This collection of transcripts is comprehensive, as demonstrated by the high number of different GO categories. An in-depth analysis revealed 245 sequences with putative homology to proteins involved in blood and sugar digestion, immune response and peritrophic matrix formation. Twelve of the novel genes, including one trypsin, two peptidoglycan recognition proteins (PGRP) and nine chymotrypsins, have a higher expression level during larval stages. Two novel chymotrypsins and one novel PGRP are abundantly expressed upon blood feeding. This study will greatly improve the available genomic resources for P. papatasi and will provide essential information for annotation of the full genome.

摘要

作为人类疾病的重要载体,白蛉在全球范围内对人类健康具有重要意义,它们传播几种新发和再发传染病。在白蛉传播的感染中,最具破坏性的是利什曼病,在新旧大陆都造成了重大的死亡率和发病率。在这里,我们首次对皮肤利什曼病的旧大陆载体白蛉进行了全球转录组分析,并将该转录组与内脏利什曼病的新大陆载体卢氏利什曼原虫进行了比较。使用来自白蛉幼虫、蛹、雄性和雌性成虫的混合 mRNA 构建了一个标准化 cDNA 文库,这些成虫分别喂食了糖、血液或感染了利什曼原虫的血液。总共产生了 47615 个序列,并将其清理和组装成 17120 个独特的转录本。在组装的序列中,使用基因本体论 (GO) 术语对 50%(8837 个序列)进行了分类。这个转录本集合是全面的,这可以从不同 GO 类别数量的众多证明。深入分析显示,有 245 个序列与参与血液和糖消化、免疫反应和围食膜形成的蛋白质具有假定同源性。在幼虫阶段表达水平较高的 12 个新基因,包括一个胰蛋白酶、两个肽聚糖识别蛋白 (PGRP) 和 9 个糜蛋白酶,12 个新基因,包括一个胰蛋白酶、两个肽聚糖识别蛋白 (PGRP) 和 9 个糜蛋白酶,在吸血时大量表达。两个新的糜蛋白酶和一个新的 PGRP 在吸血时大量表达。这项研究将极大地提高白蛉可用的基因组资源,并为全基因组注释提供重要信息。

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