来自北美的禽副黏病毒4型全基因组序列揭示了较短的基因组和新基因型。
Complete genome sequence of an avian paramyxovirus type 4 from north america reveals a shorter genome and new genotype.
作者信息
Parthiban Manoharan, Kaliyaperumal Manimaran, Xiao Sa, Nayak Baibaswata, Paldurai Anandan, Kim Shin-Hee, Ladman Brian S, Preskenis Lauren A, Gelb Jack, Collins Peter L, Samal Siba K
机构信息
Virginia-Maryland Regional College of Veterinary Medicine, University of Maryland, College Park, Maryland, USA.
出版信息
Genome Announc. 2013 Jan;1(1). doi: 10.1128/genomeA.00075-12. Epub 2013 Jan 31.
Abstract
An avian paramyxovirus type 4 (APMV-4) was isolated from a duck in Delaware in 2010. Its genome is 15,048 nucleotides (nt) long, which is shorter by 6 nt than those for all previously reported strains. Phylogenetic analysis revealed that this strain formed a separate cluster within APMV-4 strains.
摘要
2010年，一种4型禽副粘病毒（APMV-4）从特拉华州的一只鸭子中分离出来。其基因组长度为15,048个核苷酸（nt），比之前报道的所有毒株的基因组短6个nt。系统发育分析表明，该毒株在APMV-4毒株中形成了一个单独的簇。
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本文引用的文献
1
Evaluation of the genetic diversity of avian paramyxovirus type 4.评估禽副黏病毒 4 型的遗传多样性。
Virus Res. 2013 Jan;171(1):103-10. doi: 10.1016/j.virusres.2012.10.031. Epub 2012 Nov 21.
2
Full genomic sequence of an African avian paramyxovirus type 4 strain isolated from a wild duck.从一只野鸭分离出的非洲4型禽副黏病毒毒株的全基因组序列。
Virus Genes. 2012 Dec;45(3):537-41. doi: 10.1007/s11262-012-0805-y. Epub 2012 Aug 24.
3
Complete genome sequences of avian paramyxovirus type 8 strains goose/Delaware/1053/76 and pintail/Wakuya/20/78.禽副粘病毒8型毒株鹅/特拉华/1053/76和针尾鸭/若狭/20/78的全基因组序列
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4
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5
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Virus Genes. 2008 Dec;37(3):342-50. doi: 10.1007/s11262-008-0267-4. Epub 2008 Sep 3.
6
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Rev Sci Tech. 2000 Aug;19(2):443-62. doi: 10.20506/rst.19.2.1231.
7
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