• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

分子证据表明,冰川冰下存在活跃的内生微生物组。

Molecular evidence for an active endogenous microbiome beneath glacial ice.

机构信息

Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT 59717, USA.

出版信息

ISME J. 2013 Jul;7(7):1402-12. doi: 10.1038/ismej.2013.31. Epub 2013 Mar 14.

DOI:10.1038/ismej.2013.31
PMID:23486249
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3695297/
Abstract

Geologic, chemical and isotopic evidence indicate that Earth has experienced numerous intervals of widespread glaciation throughout its history, with roughly 11% of present day Earth's land surface covered in ice. Despite the pervasive nature of glacial ice both today and in Earth's past and the potential contribution of these systems to global biogeochemical cycles, the composition and phylogenetic structure of an active microbial community in subglacial systems has yet to be described. Here, using RNA-based approaches, we demonstrate the presence of active and endogenous archaeal, bacterial and eukaryal assemblages in cold (0-1 °C) subglacial sediments sampled from Robertson Glacier, Alberta, Canada. Patterns in the phylogenetic structure and composition of subglacial sediment small subunit (SSU) ribosomal RNA (rRNA) assemblages indicate greater diversity and evenness than in glacial surface environments, possibly due to facilitative or competitive interactions among populations in the subglacial environment. The combination of phylogenetically more even and more diverse assemblages in the subglacial environment suggests minimal niche overlap and optimization to capture a wider spectrum of the limited nutrients and chemical energy made available from weathering of bedrock minerals. The prevalence of SSU rRNA affiliated with lithoautotrophic bacteria, autotrophic methane producing archaea and heterotrophic eukarya in the subglacial environment is consistent with this hypothesis and suggests an active contribution to the global carbon cycle. Collectively, our findings demonstrate that subglacial environments harbor endogenous active ecosystems that have the potential to impact global biogeochemical cycles over extended periods of time.

摘要

地质、化学和同位素证据表明,地球在其历史上经历了多次广泛的冰川作用,目前大约有 11%的地球陆地表面被冰雪覆盖。尽管冰川冰在今天和地球的过去都广泛存在,并且这些系统有可能对全球生物地球化学循环做出贡献,但在亚冰区系统中,活跃微生物群落的组成和系统发育结构尚未被描述。在这里,我们使用基于 RNA 的方法,证明了在加拿大阿尔伯塔省罗伯逊冰川的冷(0-1°C)亚冰区沉积物中存在活跃的内源性古菌、细菌和真核生物组合。亚冰区沉积物小亚基(SSU)核糖体 RNA(rRNA)组合的系统发育结构和组成模式表明,多样性和均匀度大于冰川表面环境,这可能是由于亚冰区环境中的种群之间存在促进或竞争相互作用。亚冰区环境中具有更加均匀和多样化的组合的组合表明,生态位重叠最小,并且可以优化以捕获来自基岩矿物风化的有限营养物质和化学能量的更广泛的光谱。亚冰区环境中与自养产甲烷古菌和异养真核生物相关的 SSU rRNA 的流行,与这一假说一致,表明它们对全球碳循环的积极贡献。总的来说,我们的发现表明,亚冰区环境中存在内源性的活跃生态系统,这些系统有可能在较长时间内影响全球生物地球化学循环。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbec/3695297/7d9f8cd418e3/ismej201331f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbec/3695297/5efcff62eb61/ismej201331f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbec/3695297/b2e2f440c7cd/ismej201331f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbec/3695297/7d9f8cd418e3/ismej201331f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbec/3695297/5efcff62eb61/ismej201331f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbec/3695297/b2e2f440c7cd/ismej201331f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cbec/3695297/7d9f8cd418e3/ismej201331f3.jpg

相似文献

1
Molecular evidence for an active endogenous microbiome beneath glacial ice.分子证据表明,冰川冰下存在活跃的内生微生物组。
ISME J. 2013 Jul;7(7):1402-12. doi: 10.1038/ismej.2013.31. Epub 2013 Mar 14.
2
Diversity, abundance, and potential activity of nitrifying and nitrate-reducing microbial assemblages in a subglacial ecosystem.在一个冰川下生态系统中,硝化和硝酸盐还原微生物组合的多样性、丰度和潜在活性。
Appl Environ Microbiol. 2011 Jul;77(14):4778-87. doi: 10.1128/AEM.00376-11. Epub 2011 May 27.
3
Microbial diversity of an Antarctic subglacial community and high-resolution replicate sampling inform hydrological connectivity in a polar desert.南极冰下群落的微生物多样性和高分辨率重复采样为极地荒漠中的水文连通性提供了信息。
Environ Microbiol. 2019 Jul;21(7):2290-2306. doi: 10.1111/1462-2920.14607. Epub 2019 Apr 16.
4
Phylogenetic diversity and metabolic potential revealed in a glacier ice metagenome.冰川冰宏基因组中揭示的系统发育多样性和代谢潜能。
Appl Environ Microbiol. 2009 Dec;75(23):7519-26. doi: 10.1128/AEM.00946-09. Epub 2009 Oct 2.
5
Metagenomic analysis of basal ice from an Alaskan glacier.对阿拉斯加冰川底层冰的宏基因组分析。
Microbiome. 2018 Jul 5;6(1):123. doi: 10.1186/s40168-018-0505-5.
6
Distinct bacterial communities exist beneath a high Arctic polythermal glacier.在北极地区一座多热型冰川之下存在着不同的细菌群落。
Appl Environ Microbiol. 2006 Sep;72(9):5838-45. doi: 10.1128/AEM.00595-06.
7
Bacteria beneath the West Antarctic ice sheet.西南极冰盖下的细菌。
Environ Microbiol. 2009 Mar;11(3):609-15. doi: 10.1111/j.1462-2920.2008.01831.x.
8
A microbial ecosystem beneath the West Antarctic ice sheet.南极西部冰盖下的微生物生态系统。
Nature. 2014 Aug 21;512(7514):310-3. doi: 10.1038/nature13667.
9
Culturable bacteria in subglacial sediments and ice from two Southern Hemisphere glaciers.来自两个南半球冰川的冰下沉积物和冰中的可培养细菌。
Microb Ecol. 2004 May;47(4):329-40. doi: 10.1007/s00248-003-1036-5. Epub 2004 Mar 4.
10
Molecular and biogeochemical evidence for methane cycling beneath the western margin of the Greenland Ice Sheet.分子和生物地球化学证据表明格陵兰冰原西缘下方存在甲烷循环。
ISME J. 2014 Nov;8(11):2305-16. doi: 10.1038/ismej.2014.59. Epub 2014 Apr 17.

引用本文的文献

1
Microbial genetic potential differs among cryospheric habitats of the Damma glacier.微生物遗传潜能在达玛冰川的冰冻圈生境中存在差异。
Microb Genom. 2024 Oct;10(10). doi: 10.1099/mgen.0.001301.
2
Ecological interactions in glacier environments: a review of studies on a model Alpine glacier.冰川环境中的生态相互作用:以一条典型阿尔卑斯冰川为例的研究综述
Biol Rev Camb Philos Soc. 2025 Feb;100(1):227-244. doi: 10.1111/brv.13138. Epub 2024 Sep 9.
3
Perturbed maternal microbiota shapes offspring microbiota during early colonization period in mice.

本文引用的文献

1
Methanogenesis in subglacial sediments.冰川下沉积物中的产甲烷作用。
Environ Microbiol Rep. 2010 Oct;2(5):685-92. doi: 10.1111/j.1758-2229.2010.00162.x.
2
Contrasting patterns of community assembly in the stratified water column of Great Salt Lake, Utah.大盐湖分层水柱中群落组装模式的对比。
Microb Ecol. 2013 Aug;66(2):268-80. doi: 10.1007/s00248-013-0180-9. Epub 2013 Jan 25.
3
Potential methane reservoirs beneath Antarctica.南极洲下方的潜在甲烷储层。
肠道菌群紊乱会影响小鼠早期定植期的后代肠道菌群。
Proc Jpn Acad Ser B Phys Biol Sci. 2024 Jun 12;100(6):335-352. doi: 10.2183/pjab.100.020. Epub 2024 May 2.
4
Psychoactive and other ceremonial plants from a 2,000-year-old Maya ritual deposit at Yaxnohcah, Mexico.来自墨西哥 yaxnohcah 的一个 2000 年前的玛雅仪式沉积物中的致幻和其他仪式用植物。
PLoS One. 2024 Apr 26;19(4):e0301497. doi: 10.1371/journal.pone.0301497. eCollection 2024.
5
Turtle species and ecology drive carapace microbiome diversity in three seasonally interconnected wetland habitats.龟类物种和生态影响着三个季节性相互连通的湿地栖息地中龟壳微生物群落的多样性。
Access Microbiol. 2024 Jan 12;6(1). doi: 10.1099/acmi.0.000682.v3. eCollection 2024.
6
Changes in Diversity and Abundance of Ammonia-Oxidizing Archaea and Bacteria along a Glacier Retreating Chronosequence in the Tianshan Mountains, China.中国天山山脉沿冰川退缩时间序列的氨氧化古菌和细菌的多样性与丰度变化
Microorganisms. 2023 Nov 27;11(12):2871. doi: 10.3390/microorganisms11122871.
7
Glacial Water: A Dynamic Microbial Medium.冰川水:一种动态的微生物培养基。
Microorganisms. 2023 Apr 28;11(5):1153. doi: 10.3390/microorganisms11051153.
8
Microbial Community Structure and Metabolic Potential at the Initial Stage of Soil Development of the Glacial Forefields in Svalbard.斯瓦尔巴德冰川前地土壤发育初期的微生物群落结构和代谢潜力。
Microb Ecol. 2023 Aug;86(2):933-946. doi: 10.1007/s00248-022-02116-3. Epub 2022 Oct 14.
9
An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea.钨在以前未培养的厌氧嗜热古菌谱系的生态学和进化中的重要作用。
Nat Commun. 2022 Jun 30;13(1):3773. doi: 10.1038/s41467-022-31452-8.
10
DNA/RNA Preservation in Glacial Snow and Ice Samples.冰川积雪样本中的DNA/RNA保存
Front Microbiol. 2022 May 23;13:894893. doi: 10.3389/fmicb.2022.894893. eCollection 2022.
Nature. 2012 Aug 30;488(7413):633-7. doi: 10.1038/nature11374.
4
jModelTest 2: more models, new heuristics and parallel computing.jModelTest 2:更多模型、新启发式方法与并行计算。
Nat Methods. 2012 Jul 30;9(8):772. doi: 10.1038/nmeth.2109.
5
Quantification of Microbial Communities in Subsurface Marine Sediments of the Black Sea and off Namibia.黑海及纳米比亚近海海洋沉积物中微生物群落的定量分析
Front Microbiol. 2012 Jan 30;3:16. doi: 10.3389/fmicb.2012.00016. eCollection 2012.
6
UCHIME improves sensitivity and speed of chimera detection.UCHIME 提高了嵌合体检测的灵敏度和速度。
Bioinformatics. 2011 Aug 15;27(16):2194-200. doi: 10.1093/bioinformatics/btr381. Epub 2011 Jun 23.
7
Diversity, abundance, and potential activity of nitrifying and nitrate-reducing microbial assemblages in a subglacial ecosystem.在一个冰川下生态系统中,硝化和硝酸盐还原微生物组合的多样性、丰度和潜在活性。
Appl Environ Microbiol. 2011 Jul;77(14):4778-87. doi: 10.1128/AEM.00376-11. Epub 2011 May 27.
8
Marine subsurface eukaryotes: the fungal majority.海洋底层真核生物:真菌占多数。
Environ Microbiol. 2011 Jan;13(1):172-183. doi: 10.1111/j.1462-2920.2010.02318.x.
9
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities.介绍 mothur:开源、独立于平台、社区支持的软件,用于描述和比较微生物群落。
Appl Environ Microbiol. 2009 Dec;75(23):7537-41. doi: 10.1128/AEM.01541-09. Epub 2009 Oct 2.
10
Disentangling niche and neutral influences on community assembly: assessing the performance of community phylogenetic structure tests.解析生态位和中性因素对群落构建的影响:评估群落系统发育结构测试的性能
Ecol Lett. 2009 Sep;12(9):949-60. doi: 10.1111/j.1461-0248.2009.01354.x.