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计算机表达序列标签分析鉴定可能的糖尿病基因作为虚拟治疗靶点。

In silico expressed sequence tag analysis in identification of probable diabetic genes as virtual therapeutic targets.

机构信息

Centre of Biotechnology, Siksha O Anusandhan University, Bhubaneswar, Odisha 751030, India.

出版信息

Biomed Res Int. 2013;2013:704818. doi: 10.1155/2013/704818. Epub 2013 Feb 11.

Abstract

The expressed sequence tags (ESTs) are major entities for gene discovery, molecular transcripts, and single nucleotide polymorphism (SNPs) analysis as well as functional annotation of putative gene products. In our quest for identification of novel diabetic genes as virtual targets for type II diabetes, we searched various publicly available databases and found 7 reported genes. The in silico EST analysis of these reported genes produced 6 consensus contigs which illustrated some good matches to a number of chromosomes of the human genome. Again the conceptual translation of these contigs produced 3 protein sequences. The functional and structural annotations of these proteins revealed some important features which may lead to the discovery of novel therapeutic targets for the treatment of diabetes.

摘要

表达序列标签(ESTs)是发现基因、分子转录物和单核苷酸多态性(SNPs)分析以及推测基因产物功能注释的主要实体。在我们寻求鉴定新型糖尿病基因作为 II 型糖尿病的虚拟靶标时,我们搜索了各种公开可用的数据库,发现了 7 个已报道的基因。对这些报告基因的计算机 EST 分析产生了 6 个共识的连续序列,这些连续序列与人类基因组的许多染色体有很好的匹配。这些连续序列的概念翻译又产生了 3 个蛋白质序列。这些蛋白质的功能和结构注释揭示了一些可能导致发现治疗糖尿病的新治疗靶点的重要特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3cda/3582052/c262d9d0e0dc/BMRI2013-704818.001.jpg

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