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串联重复序列处植物着丝粒的从头生成。

De novo generation of plant centromeres at tandem repeats.

作者信息

Teo Chee How, Lermontova Inna, Houben Andreas, Mette Michael Florian, Schubert Ingo

机构信息

Leibniz Institute of Plant Genetics and Crop Plant Research IPK, Corrensstrasse 3, 06466 Gatersleben, Germany.

出版信息

Chromosoma. 2013 Jun;122(3):233-41. doi: 10.1007/s00412-013-0406-0. Epub 2013 Mar 23.

DOI:10.1007/s00412-013-0406-0
PMID:23525657
Abstract

Artificial minichromosomes are highly desirable tools for basic research, breeding, and biotechnology purposes. We present an option to generate plant artificial minichromosomes via de novo engineering of plant centromeres in Arabidopsis thaliana by targeting kinetochore proteins to tandem repeat arrays at non-centromeric positions. We employed the bacterial lactose repressor/lactose operator system to guide derivatives of the centromeric histone H3 variant cenH3 to LacO operator sequences. Tethering of cenH3 to non-centromeric loci led to de novo assembly of kinetochore proteins and to dicentric carrier chromosomes which potentially form anaphase bridges. This approach will be further developed and may contribute to generating minichromosomes from preselected genomic regions, potentially even in a diploid background.

摘要

人工微型染色体是用于基础研究、育种和生物技术目的的非常理想的工具。我们提出了一种通过在拟南芥中对植物着丝粒进行从头工程设计来生成植物人工微型染色体的方法,即将动粒蛋白靶向到非着丝粒位置的串联重复阵列上。我们利用细菌乳糖阻遏物/乳糖操纵子系统,将着丝粒组蛋白H3变体cenH3的衍生物引导至LacO操纵序列。将cenH3拴系到非着丝粒位点会导致动粒蛋白的从头组装,并产生可能形成后期桥的双着丝粒载体染色体。这种方法将得到进一步发展,可能有助于从预选的基因组区域生成微型染色体,甚至可能在二倍体背景下实现。

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De novo generation of plant centromeres at tandem repeats.串联重复序列处植物着丝粒的从头生成。
Chromosoma. 2013 Jun;122(3):233-41. doi: 10.1007/s00412-013-0406-0. Epub 2013 Mar 23.
2
The rapidly evolving centromere-specific histone has stringent functional requirements in Arabidopsis thaliana.快速进化的着丝粒特异性组蛋白在拟南芥中具有严格的功能要求。
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The structure, function, and evolution of plant centromeres.植物着丝粒的结构、功能和进化。

本文引用的文献

1
Construction of rice mini-chromosomes by telomere-mediated chromosomal truncation.通过端粒介导的染色体截断构建水稻微型染色体。
Plant J. 2012 Jun;70(6):1070-9. doi: 10.1111/j.1365-313X.2012.04916.x. Epub 2012 Apr 3.
2
Telomere-mediated truncation of barley chromosomes.端粒介导的大麦染色体截短
Chromosoma. 2012 Apr;121(2):181-90. doi: 10.1007/s00412-011-0351-8. Epub 2011 Nov 13.
3
Drosophila CENH3 is sufficient for centromere formation.果蝇 CENH3 足以形成着丝粒。
Genome Res. 2024 Mar 20;34(2):161-178. doi: 10.1101/gr.278409.123.
4
Towards Plant Synthetic Genomics.迈向植物合成基因组学。
Biodes Res. 2023 Oct 16;5:0020. doi: 10.34133/bdr.0020. eCollection 2023.
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Synthetic maize centromeres transmit chromosomes across generations.合成玉米着丝粒可跨代传递染色体。
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6
Boiss. repeatome characterized using low-coverage NGS as a source of new FISH markers: Application in phylogenetic studies of the Triticeae.使用低覆盖度二代测序技术表征的布瓦西重复序列组作为新型荧光原位杂交标记的来源:在小麦族系统发育研究中的应用
Front Plant Sci. 2022 Oct 5;13:980764. doi: 10.3389/fpls.2022.980764. eCollection 2022.
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Artificial chromosome technology and its potential application in plants.人工染色体技术及其在植物中的潜在应用。
Front Plant Sci. 2022 Sep 15;13:970943. doi: 10.3389/fpls.2022.970943. eCollection 2022.
8
What is behind "centromere repositioning"?“着丝粒重新定位”背后的原因是什么?
Chromosoma. 2018 Jun;127(2):229-234. doi: 10.1007/s00412-018-0672-y. Epub 2018 Apr 28.
9
Targeting of Arabidopsis KNL2 to Centromeres Depends on the Conserved CENPC-k Motif in Its C Terminus.拟南芥KNL2定位于着丝粒取决于其C端保守的CENPC-k基序。
Plant Cell. 2017 Jan;29(1):144-155. doi: 10.1105/tpc.16.00720. Epub 2017 Jan 6.
10
Atypical centromeres in plants-what they can tell us.植物中的非典型着丝粒——它们能告诉我们什么。
Front Plant Sci. 2015 Oct 26;6:913. doi: 10.3389/fpls.2015.00913. eCollection 2015.
Science. 2011 Nov 4;334(6056):686-90. doi: 10.1126/science.1206880.
4
Pairing of lacO tandem repeats in Arabidopsis thaliana nuclei requires the presence of hypermethylated, large arrays at two chromosomal positions, but does not depend on H3-lysine-9-dimethylation.拟南芥细胞核中LacO串联重复序列的配对需要在两个染色体位置存在高度甲基化的大片段,但不依赖于H3赖氨酸-9-二甲基化。
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5
HJURP is a CENP-A chromatin assembly factor sufficient to form a functional de novo kinetochore.HJURP 是一个 CENP-A 染色质组装因子,足以形成有功能的新形成的着丝粒。
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6
Induction of telomere-mediated chromosomal truncation and stability of truncated chromosomes in Arabidopsis thaliana.拟南芥中端粒介导的染色体断裂诱导及其断裂染色体的稳定性。
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Meiosis-specific loading of the centromere-specific histone CENH3 in Arabidopsis thaliana.在拟南芥中,着丝粒特异性组蛋白 CENH3 的减数分裂特异性加载。
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8
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