Institute of Ecology and Genetics of Microorganisms, Ural Branch, Russian Academy of Sciences, Goleva 13, 614081 Perm, Russia.
Extremophiles. 2013 May;17(3):499-504. doi: 10.1007/s00792-013-0534-8. Epub 2013 Mar 23.
Three pigmented strains of halophilic archaea (RS75, RS77, RS79) were isolated from the monoliths of mottled sylvinite from the Verkhnekamsk salt deposit (Solikamsk, Russia). The cells were nonmotile, gram-negative, pleomorphic, disk-shaped or ovoid, 0.8-1.0 × 1.5-2.5 μm. The organism was a chemoorganotrophic obligate aerobe producing catalase and oxidase. A number of carbohydrates and carboxylic acids were used as growth substrates. Growth occurred in the presence of 7-27% NaCl (with the optimum at 15-18%), 0.02-20% KCl (0.2-1%), 0.2-16% MgCl2 (2-3%), in the temperature range from 23 to 51 °C (40-45 °C), and pH 5.5-8.0 (6.8-7.0). The membranes contained carotenoids of the bacterioruberin series. Phosphatidylglyceromethylphosphate (PGP-Me), phosphatidylglycerol (PG), sulfated diglycosyl diether (S-DGD-1) predominated among the polar lipids. The DNA G + C content was 64.0-65.0 mol %. Phylogenetic analysis of the 16S rRNA gene sequences showed high similarity of the new strains to Haloferax species: H. denitrificans (99.2%) and H. volcanii (99.1%), H. larsenii (96.9%) and H. elongans (96.6%). DNA-DNA hybridization revealed 93-95% similarity between strain RS75 and strains RS77 and RS79; the similarity levels between strain RS75 and the type strains of Haloferax denitrificans VKM B-1754(T) and Halobacterium salinarum VKM B-1769(T) were 50 and 10%, respectively. According to its phenotypic and genotypic characteristics, the organism was classified as a member of the genus Haloferax, forming a new species with the proposed name Haloferax chudinovii sp. nov. type strain is RS75(T) (=VKPM B-11279(T)).
三种嗜盐古菌(RS75、RS77、RS79)的色素菌株从 Verkhnekamsk 盐矿床(俄罗斯 Solikamsk)的斑驳杂卤石单体中分离出来。细胞是非运动的,革兰氏阴性,多形性,盘状或卵形,0.8-1.0×1.5-2.5μm。该生物是一种化能有机需氧严格厌氧菌,产生过氧化氢酶和氧化酶。许多碳水化合物和羧酸被用作生长基质。在存在 7-27%NaCl(最佳 15-18%)、0.02-20%KCl(0.2-1%)、0.2-16%MgCl2(2-3%)、温度范围为 23-51°C(40-45°C)和 pH5.5-8.0(6.8-7.0)的情况下可以生长。膜中含有细菌红菌素系列的类胡萝卜素。极性脂质中以磷酰甘油甲基磷酸酯(PGP-Me)、磷脂酰甘油(PG)、硫酸化二糖醚(S-DGD-1)为主。DNA G+C 含量为 64.0-65.0mol%。16S rRNA 基因序列的系统发育分析表明,新菌株与 Haloferax 种高度相似:Haloferax denitrificans(99.2%)和 H. volcanii(99.1%)、H. larsenii(96.9%)和 H. elongans(96.6%)。DNA-DNA 杂交显示菌株 RS75 与菌株 RS77 和 RS79 之间的相似度为 93-95%;菌株 RS75 与 Haloferax denitrificans VKM B-1754(T)和 Halobacterium salinarum VKM B-1769(T)的模式菌株的相似度分别为 50%和 10%。根据其表型和基因型特征,该生物被归类为 Haloferax 属的成员,形成了一个新的物种,建议命名为 Haloferax chudinovii sp. nov. 模式菌株为 RS75(T)(=VKPM B-11279(T))。