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人类基因组中的病原体驱动选择

Pathogen-driven selection in the human genome.

作者信息

Cagliani Rachele, Sironi Manuela

机构信息

Bioinformatics, Scientific Institute IRCCS E. Medea, 23842 Bosisio Parini (LC), Italy.

出版信息

Int J Evol Biol. 2013;2013:204240. doi: 10.1155/2013/204240. Epub 2013 Mar 4.

Abstract

Infectious diseases and epidemics have always accompanied and characterized human history, representing one of the main causes of death. Even today, despite progress in sanitation and medical research, infections are estimated to account for about 15% of deaths. The hypothesis whereby infectious diseases have been acting as a powerful selective pressure was formulated long ago, but it was not until the availability of large-scale genetic data and the development of novel methods to study molecular evolution that we could assess how pervasively infectious agents have shaped human genetic diversity. Indeed, recent evidences indicated that among the diverse environmental factors that acted as selective pressures during the evolution of our species, pathogen load had the strongest influence. Beside the textbook example of the major histocompatibility complex, selection signatures left by pathogen-exerted pressure can be identified at several human loci, including genes not directly involved in immune response. In the future, high-throughput technologies and the availability of genetic data from different populations are likely to provide novel insights into the evolutionary relationships between the human host and its pathogens. Hopefully, this will help identify the genetic determinants modulating the susceptibility to infectious diseases and will translate into new treatment strategies.

摘要

传染病和流行病一直伴随着人类历史并成为其特征之一,是主要死因之一。即便在今天,尽管卫生条件和医学研究取得了进展,但据估计感染仍占死亡人数的约15%。传染病一直作为强大的选择压力这一假说很早就已提出,但直到有了大规模遗传数据以及研究分子进化的新方法的发展,我们才能够评估感染因子在多大程度上塑造了人类遗传多样性。的确,最近的证据表明,在我们物种进化过程中作为选择压力的各种环境因素中,病原体负荷的影响最为强烈。除了主要组织相容性复合体这个典型例子外,在几个人类基因座上都能识别出病原体施加压力留下的选择印记,包括那些不直接参与免疫反应的基因。未来,高通量技术以及来自不同人群的遗传数据可能会为人类宿主与其病原体之间的进化关系提供新的见解。有望这将有助于识别调节对传染病易感性的遗传决定因素,并转化为新的治疗策略。

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