Program in Chemical Physics and Biofrontiers Institute, University of Colorado at Boulder, Boulder, CO, USA.
Phys Biol. 2013 Jun;10(3):036004. doi: 10.1088/1478-3975/10/3/036004. Epub 2013 Apr 16.
Regulating physical size is an essential problem that biological organisms must solve from the subcellular to the organismal scales, but it is not well understood what physical principles and mechanisms organisms use to sense and regulate their size. Any biophysical size-regulation scheme operates in a noisy environment and must be robust to other cellular dynamics and fluctuations. This work develops theory of filament length regulation inspired by recent experiments on kinesin-8 motor proteins, which move with directional bias on microtubule filaments and alter microtubule dynamics. Purified kinesin-8 motors can depolymerize chemically-stabilized microtubules. In the length-dependent depolymerization model, the rate of depolymerization tends to increase with filament length, because long filaments accumulate more motors at their tips and therefore shorten more quickly. When balanced with a constant filament growth rate, this mechanism can lead to a fixed polymer length. However, the mechanism by which kinesin-8 motors affect the length of dynamic microtubules in cells is less clear. We study the more biologically realistic problem of microtubule dynamic instability modulated by a motor-dependent increase in the filament catastrophe frequency. This leads to a significant decrease in the mean filament length and a narrowing of the filament length distribution. The results improve our understanding of the biophysics of length regulation in cells.
调节物理尺寸是生物必须解决的一个基本问题,从亚细胞到生物体的各个尺度都需要解决这个问题,但目前还不清楚生物体使用什么物理原理和机制来感知和调节其大小。任何生物物理尺寸调节方案都在嘈杂的环境中运行,必须对其他细胞动力学和波动具有鲁棒性。这项工作受最近关于 kinesin-8 马达蛋白的实验的启发,提出了一种丝状长度调节的理论,该蛋白在微管丝上具有定向偏差的运动,并改变微管丝的动力学。纯化的 kinesin-8 马达可以使化学稳定的微管丝解聚。在长度依赖性解聚模型中,解聚的速率往往随丝的长度增加而增加,因为长丝在其尖端积累更多的马达,因此缩短得更快。当与恒定的丝生长速率平衡时,这种机制可以导致聚合物长度固定。然而,kinesin-8 马达如何影响细胞中动态微管丝长度的机制还不太清楚。我们研究了更具生物学意义的问题,即由马达依赖性丝状崩溃频率增加调制的微管动态不稳定性。这导致平均丝长度显著减小,丝长度分布变窄。这些结果提高了我们对细胞内长度调节的生物物理学的理解。