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评估 Verigene 革兰阳性血培养核酸检测试验快速检测细菌和耐药决定因素的能力。

Evaluation of the Verigene Gram-positive blood culture nucleic acid test for rapid detection of bacteria and resistance determinants.

机构信息

Department of Pathology, Fletcher Allen Health Care/University of Vermont, Burlington, Vermont, USA.

出版信息

J Clin Microbiol. 2013 Jul;51(7):2072-6. doi: 10.1128/JCM.00831-13. Epub 2013 Apr 17.

Abstract

Rapid identification of pathogens from blood cultures can decrease lengths of stay and improve patient outcomes. We evaluated the accuracy of the Verigene Gram-positive blood culture (BC-GP) nucleic acid test for investigational use only (Nanosphere, Inc., Northbrook, IL) for the identification of Gram-positive bacteria from blood cultures. The detection of resistance genes (mecA in Staphylococcus aureus and Staphylococcus epidermidis and vanA or vanB in Enterococcus faecium and Enterococcus faecalis) by the BC-GP assay also was assessed. A total of 186 positive blood cultures (in BacT/Alert FA bottles) with Gram-positive cocci observed with Gram staining were analyzed using the BC-GP assay. The BC-GP results were compared with the identification and susceptibility profiles obtained with routine methods in the clinical laboratory. Discordant results were arbitrated with additional biochemical, cefoxitin disk, and repeat BC-GP testing. The initial BC-GP organism identification was concordant with routine method results for 94.6% of the blood cultures. Only 40% of the Streptococcus pneumoniae identifications were correct. The detection of the mecA gene for 69 blood cultures with only S. aureus or S. epidermidis was concordant with susceptibility testing results. For 3 of 6 cultures with multiple Staphylococcus spp., mecA detection was reported but was correlated with oxacillin resistance in a species other than S. aureus or S. epidermidis. The detection of vanA agreed with susceptibility testing results for 45 of 46 cultures with E. faecalis or E. faecium. Comparison of the mean times to results for each organism group showed that BC-GP results were available 31 to 42 h earlier than phenotypic identifications and 41 to 50 h earlier than susceptibility results.

摘要

快速鉴定血培养中的病原体可以缩短住院时间,改善患者预后。我们评估了仅用于研究的 Verigene 革兰阳性菌血培养(BC-GP)核酸检测(Nanosphere,Inc.,Northbrook,IL)对血培养中革兰阳性菌的鉴定准确性。还评估了 BC-GP 检测对葡萄球菌(金黄色葡萄球菌和表皮葡萄球菌)中 mecA 基因和肠球菌(粪肠球菌和屎肠球菌)中 vanA 或 vanB 基因的耐药性检测。对革兰氏染色观察到的 186 份阳性血培养(BacT/Alert FA 瓶)进行了 BC-GP 检测分析。将 BC-GP 结果与临床实验室常规方法获得的鉴定和药敏谱进行比较。对不一致的结果进行仲裁,采用额外的生化、头孢西丁药敏纸片和重复 BC-GP 检测。初始 BC-GP 鉴定与常规方法结果的一致性为 94.6%的血培养。只有 40%的肺炎链球菌鉴定结果是正确的。69 份仅为金黄色葡萄球菌或表皮葡萄球菌的血培养中 mecA 基因的检测结果与药敏试验结果一致。在 3 份含有多种葡萄球菌的培养物中,报告了 mecA 的检测,但与除金黄色葡萄球菌或表皮葡萄球菌以外的其他物种的耐苯唑西林相关。46 份粪肠球菌或屎肠球菌中有 45 份的 vanA 检测结果与药敏试验结果一致。对每组平均时间的比较显示,BC-GP 结果比表型鉴定早 31 到 42 小时,比药敏试验结果早 41 到 50 小时。

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