Department of Food Science and Technology and Functional Food Research Center, Chonnam National University, Gwangju 500-757, Republic of Korea.
Department of Biological Sciences, Korea Basic Science Institute, Daejeon 305-806, Republic of Korea.
Int J Syst Evol Microbiol. 2013 Oct;63(Pt 10):3697-3703. doi: 10.1099/ijs.0.047951-0. Epub 2013 Apr 26.
An alginate lyase-producing bacterium, designated AlyHP32(T), was isolated from the gut of sea urchin (Hemicentrotus pulcherrimus) obtained from the South Sea, Republic of Korea. Cells of strain AlyHP32(T) were Gram-reaction-negative and motile with a single polar flagellum. The strain grew with 1-6 % (w/v) NaCl (optimum 2-4 %) and at 4-30 °C (optimum 15-25 °C). Phylogenetic analysis based on sequences of the 16S rRNA gene and five housekeeping genes (atpA, pyrH, recA, rpoA and rpoD) revealed that strain AlyHP32(T) belonged to the genus Vibrio and formed a compact clade with the Vibrio splendidus group. However, DNA-DNA hybridization and fingerprints using the repetitive primers BOX and REP indicated that strain AlyHP32(T) was distinct from closely related species of the genus Vibrio. The major fatty acids were summed feature 3 (C16:1ω7c and/or C16:1ω6c) and C16:0. The DNA G+C content was 44.1 mol%. The predominant quinone was ubiquinone Q-8. Based on genotypic, phenotypic and DNA-DNA hybridization analysis, strain AlyHP32(T) represents a novel species of the genus Vibrio; the name Vibrio hemicentroti sp. nov. (type strain AlyHP32(T) = KCTC 32085(T) = DSM 26178(T)) is proposed for this novel taxon.
一株产褐藻胶裂解酶的细菌,命名为 AlyHP32(T),从韩国南海获得的海胆(Hemicentrotus pulcherrimus)肠道中分离得到。AlyHP32(T) 菌株的细胞革兰氏反应阴性,运动性强,具有单极鞭毛。该菌株在 1-6%(w/v)NaCl(最佳 2-4%)和 4-30°C(最佳 15-25°C)下生长。基于 16S rRNA 基因和五个管家基因(atpA、pyrH、recA、rpoA 和 rpoD)的序列进行的系统发育分析表明,菌株 AlyHP32(T) 属于弧菌属,与灿烂弧菌群形成紧密分支。然而,DNA-DNA 杂交和使用重复引物 BOX 和 REP 的指纹图谱表明,菌株 AlyHP32(T) 与弧菌属的密切相关种不同。主要脂肪酸为特征 3 脂肪酸(C16:1ω7c 和/或 C16:1ω6c)和 C16:0。DNA G+C 含量为 44.1 mol%。主要醌为泛醌 Q-8。基于基因型、表型和 DNA-DNA 杂交分析,菌株 AlyHP32(T) 代表弧菌属的一个新种;建议将该新分类群命名为 Vibrio hemicentroti sp. nov.(模式菌株 AlyHP32(T)=KCTC 32085(T)=DSM 26178(T))。