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本文引用的文献

1
Adaptive evolution for fast growth on glucose and the effects on the regulation of glucose transport system in Clostridium tyrobutyricum.在葡萄糖上的快速生长的适应性进化及其对丁酸梭菌葡萄糖转运系统调控的影响。
Biotechnol Bioeng. 2012 Mar;109(3):708-18. doi: 10.1002/bit.23346. Epub 2011 Dec 20.
2
Control and optimization of Clostridium tyrobutyricum ATCC 25755 adhesion into fibrous matrix in a fibrous bed bioreactor.在纤维床生物反应器中控制和优化凝结芽孢杆菌 ATCC 25755 黏附到纤维基质中。
Appl Biochem Biotechnol. 2011 Sep;165(1):98-108. doi: 10.1007/s12010-011-9236-9. Epub 2011 Apr 12.
3
Enhanced butyric acid tolerance and bioproduction by Clostridium tyrobutyricum immobilized in a fibrous bed bioreactor.固定化在纤维床生物反应器中的酪丁酸梭菌提高了丁酸耐受性和生物产量。
Biotechnol Bioeng. 2011 Jan;108(1):31-40. doi: 10.1002/bit.22927.
4
Phosphoenolpyruvate-dependent phosphorylation of sucrose by Clostridium tyrobutyricum ZJU 8235: evidence for the phosphotransferase transport system.酪丁酸梭菌ZJU 8235对蔗糖的磷酸烯醇丙酮酸依赖性磷酸化作用：磷酸转移酶转运系统的证据
Bioresour Technol. 2010 Jan;101(1):304-9. doi: 10.1016/j.biortech.2009.08.024. Epub 2009 Sep 1.
5
Butyric acid fermentation in a fibrous bed bioreactor with immobilized Clostridium tyrobutyricum from cane molasses.利用固定化酪丁酸梭状芽孢杆菌在纤维床生物反应器中从甘蔗糖蜜进行丁酸发酵。
Bioresour Technol. 2009 Jul;100(13):3403-9. doi: 10.1016/j.biortech.2009.02.032. Epub 2009 Mar 17.
6
Production of butyric acid from glucose and xylose with immobilized cells of Clostridium tyrobutyricum in a fibrous-bed bioreactor.在纤维床生物反应器中，利用固定化 Clostridium tyrobutyricum 细胞从葡萄糖和木糖生产丁酸。
Appl Biochem Biotechnol. 2010 Jan;160(2):350-9. doi: 10.1007/s12010-008-8305-1. Epub 2008 Jul 24.
7
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.《天鹅绒：使用德布鲁因图进行从头短读长拼接的算法》
Genome Res. 2008 May;18(5):821-9. doi: 10.1101/gr.074492.107. Epub 2008 Mar 18.
8
The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
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RNAmmer: consistent and rapid annotation of ribosomal RNA genes.RNAmmer：核糖体RNA基因的一致性快速注释
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
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Identifying bacterial genes and endosymbiont DNA with Glimmer.使用Glimmer识别细菌基因和内共生体DNA。
Bioinformatics. 2007 Mar 15;23(6):673-9. doi: 10.1093/bioinformatics/btm009. Epub 2007 Jan 19.

丁酸高产菌株酪丁酸梭菌ATCC 25755的基因组序列

Genome Sequence of Clostridium tyrobutyricum ATCC 25755, a Butyric Acid-Overproducing Strain.

作者信息

Jiang Ling, Zhu Liying, Xu Xian, Li Yanping, Li Shuang, Huang He

机构信息

College of Food Science and Light Industry, Nanjing University of Technology, Nanjing, China.

出版信息

Genome Announc. 2013 May 30;1(3):e00308-13. doi: 10.1128/genomeA.00308-13.

DOI:10.1128/genomeA.00308-13
PMID:23723404
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3668012/
Abstract

Clostridium tyrobutyricum ATCC 25755 is an efficient producer of butyric acid. Here we report a 3.01-Mb assembly of its genome sequence and other useful information, including the coding sequences (CDSs) responsible for an alternative pathway leading to acetate synthesis as well as a series of membrane transport systems.

摘要

酪丁酸梭菌ATCC 25755是丁酸的高效生产者。在此，我们报告了其基因组序列的3.01 Mb组装结果以及其他有用信息，包括负责导致乙酸盐合成的替代途径的编码序列（CDS）以及一系列膜转运系统。