• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过定点饱和突变工程化嗜热双歧杆菌中的间二氨基庚二酸脱氢酶用于 D-苯丙氨酸的合成。

Engineering the meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum by site saturation mutagenesis for D-phenylalanine synthesis.

机构信息

National Engineering Laboratory for Industrial Enzymes and Tianjin Engineering Center for Biocatalytic Technology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.

出版信息

Appl Environ Microbiol. 2013 Aug;79(16):5078-81. doi: 10.1128/AEM.01049-13. Epub 2013 May 31.

DOI:10.1128/AEM.01049-13
PMID:23728814
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3754726/
Abstract

In order to enlarge the substrate binding pocket of the meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum to accommodate larger 2-keto acids, four amino acid residues (Phe146, Thr171, Arg181, and His227) were targeted for site saturation mutagenesis. Among all mutants, the single mutant H227V had a specific activity of 2.39 ± 0.06 U · mg(-1), which was 35.1-fold enhancement over the wild-type enzyme.

摘要

为了扩大嗜热栖热菌中中间二氨基庚二酸脱氢酶的基质结合口袋,以容纳更大的 2-酮酸,针对四个氨基酸残基(F146、T171、R181 和 H227)进行了定点饱和突变。在所有突变体中,单突变体 H227V 的比活为 2.39 ± 0.06 U·mg(-1),比野生型酶提高了 35.1 倍。

相似文献

1
Engineering the meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum by site saturation mutagenesis for D-phenylalanine synthesis.通过定点饱和突变工程化嗜热双歧杆菌中的间二氨基庚二酸脱氢酶用于 D-苯丙氨酸的合成。
Appl Environ Microbiol. 2013 Aug;79(16):5078-81. doi: 10.1128/AEM.01049-13. Epub 2013 May 31.
2
A novel meso-Diaminopimelate dehydrogenase from Symbiobacterium thermophilum: overexpression, characterization, and potential for D-amino acid synthesis.一株嗜热栖热菌中新型的间二氨基庚二酸脱氢酶:过表达、特性鉴定及其用于 D-氨基酸合成的潜力。
Appl Environ Microbiol. 2012 Dec;78(24):8595-600. doi: 10.1128/AEM.02234-12. Epub 2012 Sep 28.
3
Essential role of amino acid position 71 in substrate preference by meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum IAM14863.热生菌 Symbiobacterium thermophilum IAM14863 中中-二氨基庚二酸脱氢酶的氨基酸位置 71 对底物偏好的重要作用。
Enzyme Microb Technol. 2018 Apr;111:57-62. doi: 10.1016/j.enzmictec.2018.01.001. Epub 2018 Jan 3.
4
A Newly Determined Member of the -Diaminopimelate Dehydrogenase Family with a Broad Substrate Spectrum.一种新确定的具有广泛底物谱的二氨基庚二酸脱氢酶家族成员。
Appl Environ Microbiol. 2017 May 17;83(11). doi: 10.1128/AEM.00476-17. Print 2017 Jun 1.
5
Enhancing the amination activity of meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum by modifying the crucial residue His154 for deamination.通过修饰脱氨酶关键残基 His154 来提高嗜热栖热菌中间二氨基庚二酸脱氢酶的胺化活性。
J Biotechnol. 2024 Sep 20;393:1-6. doi: 10.1016/j.jbiotec.2024.07.015. Epub 2024 Jul 20.
6
Structural and mutational studies on the unusual substrate specificity of meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum.热栖甲基杆菌中 meso-二氨基庚二酸脱氢酶异常底物特异性的结构和突变研究。
Chembiochem. 2014 Jan 24;15(2):217-22. doi: 10.1002/cbic.201300691. Epub 2013 Dec 11.
7
Structure-Based Engineering of an Artificially Generated NADP-Dependent d-Amino Acid Dehydrogenase.基于结构的人工合成NADP依赖型D-氨基酸脱氢酶工程设计
Appl Environ Microbiol. 2017 May 17;83(11). doi: 10.1128/AEM.00491-17. Print 2017 Jun 1.
8
Insight into the Highly Conserved and Differentiated Cofactor-Binding Sites of meso-Diaminopimelate Dehydrogenase StDAPDH.洞悉 meso-二氨基庚二酸脱氢酶 StDAPDH 的高度保守和分化的辅助因子结合位点。
J Chem Inf Model. 2019 May 28;59(5):2331-2338. doi: 10.1021/acs.jcim.8b00879. Epub 2019 Mar 12.
9
Site-directed mutagenesis of a hexapeptide segment involved in substrate recognition of phenylalanine dehydrogenase from Thermoactinomyces intermedius.嗜热放线菌苯丙氨酸脱氢酶底物识别相关六肽段的定点诱变
J Biochem. 1993 Jul;114(1):69-75. doi: 10.1093/oxfordjournals.jbchem.a124142.
10
Structural analysis reveals the substrate-binding mechanism for the expanded substrate specificity of mutant meso-diaminopimelate dehydrogenase.结构分析揭示了突变型中-二氨基庚二酸脱氢酶底物特异性扩展的底物结合机制。
Chembiochem. 2015 Apr 13;16(6):924-9. doi: 10.1002/cbic.201402632. Epub 2015 Mar 6.

引用本文的文献

1
Engineered Biocatalysts for the Asymmetric Synthesis of d-Phenylalanines.用于不对称合成D-苯丙氨酸的工程化生物催化剂。
ACS Catal. 2025 Apr 18;15(9):7361-7389. doi: 10.1021/acscatal.5c00837. eCollection 2025 May 2.
2
Spectroscopic Investigation of Hydrogels Formed from Phenylalanine.对由苯丙氨酸形成的水凝胶的光谱研究。
J Fluoresc. 2024 Dec 10. doi: 10.1007/s10895-024-04055-3.
3
Enzymatic synthesis of mono- and trifluorinated alanine enantiomers expands the scope of fluorine biocatalysis.单氟和三氟丙氨酸对映体的酶促合成扩展了氟生物催化的范围。
Commun Chem. 2024 May 9;7(1):104. doi: 10.1038/s42004-024-01188-1.
4
A multi-enzyme cascade for efficient production of D-p-hydroxyphenylglycine from L-tyrosine.一种用于从L-酪氨酸高效生产D-对羟基苯甘氨酸的多酶级联反应。
Bioresour Bioprocess. 2021 May 21;8(1):41. doi: 10.1186/s40643-021-00394-2.
5
Rational Design of -Diaminopimelate Dehydrogenase with Enhanced Reductive Amination Activity for Efficient Production of d--Hydroxyphenylglycine.理性设计 - 二氨基庚二酸脱氢酶以增强还原胺化活性,用于高效生产 d--羟基苯甘氨酸。
Appl Environ Microbiol. 2023 May 31;89(5):e0010923. doi: 10.1128/aem.00109-23. Epub 2023 Apr 18.
6
Highly selective synthesis of d-amino acids from readily available l-amino acids by a one-pot biocatalytic stereoinversion cascade.通过一锅法生物催化立体转化级联反应从易得的 l-氨基酸高效选择性合成 d-氨基酸。
RSC Adv. 2019 Sep 23;9(51):29927-29935. doi: 10.1039/c9ra06301c. eCollection 2019 Sep 18.
7
Highly selective synthesis of D-amino acids via stereoinversion of corresponding counterpart by an in vivo cascade cell factory.通过体内级联细胞工厂对相应对映体进行立体反转,高选择性合成 D-氨基酸。
Microb Cell Fact. 2021 Jan 9;20(1):11. doi: 10.1186/s12934-020-01506-x.
8
Advances in Enzymatic Synthesis of D-Amino Acids.D-氨基酸的酶法合成进展。
Int J Mol Sci. 2020 May 1;21(9):3206. doi: 10.3390/ijms21093206.
9
Supramolecular Chiral Discrimination of D-Phenylalanine Amino Acid Based on a Perylene Bisimide Derivative.基于苝二酰亚胺衍生物的D-苯丙氨酸的超分子手性识别
Front Bioeng Biotechnol. 2020 Mar 4;8:160. doi: 10.3389/fbioe.2020.00160. eCollection 2020.
10
Highly Atom Economic Synthesis of d-2-Aminobutyric Acid through an In Vitro Tri-enzymatic Catalytic System.通过体外三酶催化体系实现d-2-氨基丁酸的高原子经济性合成
ChemistryOpen. 2017 Jul 17;6(4):534-540. doi: 10.1002/open.201700093. eCollection 2017 Aug.

本文引用的文献

1
A novel meso-Diaminopimelate dehydrogenase from Symbiobacterium thermophilum: overexpression, characterization, and potential for D-amino acid synthesis.一株嗜热栖热菌中新型的间二氨基庚二酸脱氢酶:过表达、特性鉴定及其用于 D-氨基酸合成的潜力。
Appl Environ Microbiol. 2012 Dec;78(24):8595-600. doi: 10.1128/AEM.02234-12. Epub 2012 Sep 28.
2
Creation of a thermostable NADP⁺-dependent D-amino acid dehydrogenase from Ureibacillus thermosphaericus strain A1 meso-diaminopimelate dehydrogenase by site-directed mutagenesis.通过定点突变从 Ureibacillus thermosphaericus 菌株 A1 中构建耐热的依赖 NADP+的 D-氨基酸脱氢酶和 meso-二氨基庚二酸脱氢酶。
Biotechnol Lett. 2012 Sep;34(9):1693-9. doi: 10.1007/s10529-012-0952-1. Epub 2012 May 22.
3
LigPlot+: multiple ligand-protein interaction diagrams for drug discovery.LigPlot+:用于药物发现的多种配体-蛋白质相互作用图。
J Chem Inf Model. 2011 Oct 24;51(10):2778-86. doi: 10.1021/ci200227u. Epub 2011 Oct 5.
4
Nutritional and medicinal aspects of D-amino acids.D-氨基酸的营养和药用方面。
Amino Acids. 2012 May;42(5):1553-82. doi: 10.1007/s00726-011-0915-1. Epub 2011 Apr 26.
5
Origin, microbiology, nutrition, and pharmacology of D-amino acids.D-氨基酸的起源、微生物学、营养学和药理学。
Chem Biodivers. 2010 Jun;7(6):1491-530. doi: 10.1002/cbdv.200900225.
6
Biocatalytic asymmetric amination of carbonyl functional groups - a synthetic biology approach to organic chemistry.生物催化羰基官能团的不对称胺化 - 有机化学的合成生物学方法。
Biotechnol J. 2009 Oct;4(10):1420-31. doi: 10.1002/biot.200900110.
7
Modelling substrate specificity and enantioselectivity for lipases and esterases by substrate-imprinted docking.通过底物印迹对接对脂肪酶和酯酶的底物特异性和对映体选择性进行建模。
BMC Struct Biol. 2009 Jun 3;9:39. doi: 10.1186/1472-6807-9-39.
8
Predicting substrates by docking high-energy intermediates to enzyme structures.通过将高能中间体对接至酶结构来预测底物
J Am Chem Soc. 2006 Dec 13;128(49):15882-91. doi: 10.1021/ja065860f.
9
Creation of a broad-range and highly stereoselective D-amino acid dehydrogenase for the one-step synthesis of D-amino acids.构建用于一步合成D-氨基酸的宽范围且高立体选择性的D-氨基酸脱氢酶。
J Am Chem Soc. 2006 Aug 23;128(33):10923-9. doi: 10.1021/ja0603960.
10
Biochemical profiling in silico--predicting substrate specificities of large enzyme families.计算机辅助生化分析——预测大型酶家族的底物特异性
J Biotechnol. 2006 Jun 25;124(1):108-16. doi: 10.1016/j.jbiotec.2006.01.027. Epub 2006 Mar 7.