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4
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5
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本文引用的文献
1
Genenames.org: the HGNC resources in 2013.
Nucleic Acids Res. 2013 Jan;41(Database issue):D545-52. doi: 10.1093/nar/gks1066. Epub 2012 Nov 17.
2
GeneView: a comprehensive semantic search engine for PubMed.
Nucleic Acids Res. 2012 Jul;40(Web Server issue):W585-91. doi: 10.1093/nar/gks563. Epub 2012 Jun 12.
3
MeInfoText 2.0: gene methylation and cancer relation extraction from biomedical literature.
BMC Bioinformatics. 2011 Dec 14;12:471. doi: 10.1186/1471-2105-12-471.
4
PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries.
BMC Bioinformatics. 2011 Nov 9;12:435. doi: 10.1186/1471-2105-12-435.
5
Génie: literature-based gene prioritization at multi genomic scale.
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W455-61. doi: 10.1093/nar/gkr246. Epub 2011 May 23.
6
Diagnosis of prostate cancer using differentially expressed genes in stroma.
Cancer Res. 2011 Apr 1;71(7):2476-87. doi: 10.1158/0008-5472.CAN-10-2585.
7
UniProt Knowledgebase: a hub of integrated protein data.
Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011.
8
DrugBank 3.0: a comprehensive resource for 'omics' research on drugs.
Nucleic Acids Res. 2011 Jan;39(Database issue):D1035-41. doi: 10.1093/nar/gkq1126. Epub 2010 Nov 8.
9
DDPC: Dragon Database of Genes associated with Prostate Cancer.
Nucleic Acids Res. 2011 Jan;39(Database issue):D980-5. doi: 10.1093/nar/gkq849. Epub 2010 Sep 29.
10
GeneCards Version 3: the human gene integrator.
Database (Oxford). 2010 Aug 5;2010:baq020. doi: 10.1093/database/baq020.
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