Institute for Cell and Molecular Biosciences, The Medical School, Newcastle University, Framlington Place, Newcastle Upon Tyne NE2 4HH, United Kingdom.
Curr Opin Struct Biol. 2013 Oct;23(5):669-77. doi: 10.1016/j.sbi.2013.05.005. Epub 2013 Jun 13.
Plant cell walls are complex configurations of polysaccharides that are recalcitrant to degradation. The enzymes deployed by microbes to degrade these materials comprise glycoside hydrolases, polysaccharide lyases, carbohydrate esterases and polysaccharide oxidases. Non-catalytic carbohydrate-binding modules (CBMs) are found as discretely folded units within the multi-modular structures of these enzymes where they play critical roles in the recognition of plant cell wall components and potentiating the activity of the enzymes. Here we propose a refinement to the Types A, B, and C classification of CBMs whereby the Type A CBMs remain those that bind the surfaces of crystalline polysaccharides but the Type B CBMs are redefined as those that bind internally on glycan chains (endo-type), CBMs that bind to the termini of glycan chains are defined as Type C modules (exo-type). In this context, we discuss recent advances, primarily driven by structural studies, which reveal the molecular modes of CBM-sugar interactions and how this specifically underpins and influences the biological function of CBMs in cell wall recognition and degradation.
植物细胞壁是多糖的复杂结构,难以降解。微生物用来降解这些物质的酶包括糖苷水解酶、多糖裂解酶、碳水化合物酯酶和多糖氧化酶。非催化性碳水化合物结合模块(CBM)作为这些酶的多模块结构中的离散折叠单元存在,在识别植物细胞壁成分和增强酶活性方面发挥着关键作用。在这里,我们对 CBM 的 A、B 和 C 型分类提出了改进,其中 A 型 CBM 仍然是那些结合结晶多糖表面的 CBM,而 B 型 CBM 被重新定义为那些结合聚糖链内部的 CBM(内型)。在这种情况下,我们讨论了最近的进展,主要由结构研究驱动,这些研究揭示了 CBM-糖相互作用的分子模式,以及这如何具体支持和影响 CBM 在细胞壁识别和降解中的生物学功能。