Boraston Alisdair B, Bolam David N, Gilbert Harry J, Davies Gideon J
Biochemistry and Microbiology, University of Victoria, PO Box 3055 STN CSC, Victoria, BC, Canada V8W 3P6.
Biochem J. 2004 Sep 15;382(Pt 3):769-81. doi: 10.1042/BJ20040892.
The enzymic degradation of insoluble polysaccharides is one of the most important reactions on earth. Despite this, glycoside hydrolases attack such polysaccharides relatively inefficiently as their target glycosidic bonds are often inaccessible to the active site of the appropriate enzymes. In order to overcome these problems, many of the glycoside hydrolases that utilize insoluble substrates are modular, comprising catalytic modules appended to one or more non-catalytic CBMs (carbohydrate-binding modules). CBMs promote the association of the enzyme with the substrate. In view of the central role that CBMs play in the enzymic hydrolysis of plant structural and storage polysaccharides, the ligand specificity displayed by these protein modules and the mechanism by which they recognize their target carbohydrates have received considerable attention since their discovery almost 20 years ago. In the last few years, CBM research has harnessed structural, functional and bioinformatic approaches to elucidate the molecular determinants that drive CBM-carbohydrate recognition. The present review summarizes the impact structural biology has had on our understanding of the mechanisms by which CBMs bind to their target ligands.
不溶性多糖的酶促降解是地球上最重要的反应之一。尽管如此,糖苷水解酶对这类多糖的攻击效率相对较低,因为它们的目标糖苷键通常无法被相应酶的活性位点所接近。为了克服这些问题,许多利用不溶性底物的糖苷水解酶是模块化的,由连接到一个或多个非催化性碳水化合物结合模块(CBMs)的催化模块组成。CBMs促进酶与底物的结合。鉴于CBMs在植物结构和储存多糖的酶促水解中所起的核心作用,自近20年前发现这些蛋白质模块以来,它们所表现出的配体特异性以及识别其目标碳水化合物的机制受到了相当大的关注。在过去几年中,CBM研究利用结构、功能和生物信息学方法来阐明驱动CBM-碳水化合物识别的分子决定因素。本综述总结了结构生物学对我们理解CBMs与其目标配体结合机制的影响。