Department of Life Sciences, International Medical University, Kuala Lumpur, Malaysia.
Extremophiles. 2013 Sep;17(5):733-45. doi: 10.1007/s00792-013-0555-3. Epub 2013 Jun 29.
A range of small- to moderate-scale studies of patterns in bacterial biodiversity have been conducted in Antarctica over the last two decades, most suggesting strong correlations between the described bacterial communities and elements of local environmental heterogeneity. However, very few of these studies have advanced interpretations in terms of spatially associated patterns, despite increasing evidence of patterns in bacterial biogeography globally. This is likely to be a consequence of restricted sampling coverage, with most studies to date focusing only on a few localities within a specific Antarctic region. Clearly, there is now a need for synthesis over a much larger spatial to consolidate the available data. In this study, we collated Antarctic bacterial culture identities based on the 16S rRNA gene information available in the literature and the GenBank database (n > 2,000 sequences). In contrast to some recent evidence for a distinct Antarctic microbiome, our phylogenetic comparisons show that a majority (~75 %) of Antarctic bacterial isolates were highly similar (≥99 % sequence similarity) to those retrieved from tropical and temperate regions, suggesting widespread distribution of eurythermal mesophiles in Antarctic environments. However, across different Antarctic regions, the dominant bacterial genera exhibit some spatially distinct diversity patterns analogous to those recently proposed for Antarctic terrestrial macroorganisms. Taken together, our results highlight the threat of cross-regional homogenisation in Antarctic biodiversity, and the imperative to include microbiota within the framework of biosecurity measures for Antarctica.
在过去的二十年中,已经在南极洲进行了一系列针对细菌生物多样性模式的小规模到中等规模的研究,大多数研究表明,描述的细菌群落与当地环境异质性的元素之间存在强烈的相关性。然而,尽管全球范围内有越来越多的细菌生物地理学模式的证据,但这些研究中很少有能够在空间相关模式方面进行深入的解释。这很可能是由于采样范围有限造成的,迄今为止,大多数研究仅关注特定南极地区的少数几个地点。显然,现在需要在更大的空间范围内进行综合,以整合现有数据。在这项研究中,我们根据文献中可获得的 16S rRNA 基因信息和 GenBank 数据库(n>2000 个序列)汇总了南极细菌培养物的身份。与最近一些关于独特的南极微生物组的证据相反,我们的系统发育比较表明,大多数(约 75%)南极细菌分离物与从热带和温带地区获得的分离物高度相似(≥99%的序列相似性),这表明在南极环境中广泛分布着广温中生菌。然而,在不同的南极地区,优势细菌属表现出一些空间上不同的多样性模式,类似于最近为南极陆地生物提出的模式。总之,我们的研究结果强调了南极生物多样性面临的跨区域同质化的威胁,以及必须将微生物组纳入南极生物安保措施的框架。