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分析嗜冷菌 Colwellia maris 和 Colwellia psychrerythraea 单体异柠檬酸脱氢酶的冷活性相关氨基酸残基。

Analysis of amino acid residues involved in cold activity of monomeric isocitrate dehydrogenase from psychrophilic bacteria, Colwellia maris and Colwellia psychrerythraea.

机构信息

Biosystems Science Course, Graduate School of Life Science, Hokkaido University, Kita 10-jo Nishi 8-chome, Kita-ku, Sapporo 060-0810, Japan.

出版信息

J Biosci Bioeng. 2013 Nov;116(5):567-72. doi: 10.1016/j.jbiosc.2013.05.012. Epub 2013 Jul 3.

DOI:10.1016/j.jbiosc.2013.05.012
PMID:23830032
Abstract

Monomeric isocitrate dehydrogenases from psychrophilic bacteria, Colwellia maris and Colwellia psychrerythraea (CmIDH-II and CpIDH-M, respectively) are cold-adapted enzymes and show a high degree of amino acid sequential identity to each other (77%). However, maximum activity of CpIDH-M at optimum temperature is much less than that of CmIDH-II. In the C-terminal region 3 of these enzymes, which was suggested from previous study to be responsible for their distinct catalytic ability, several sequential differences of amino acid residue are present. Among them, ten amino acid residues were exchanged between them by site-directed mutagenesis and several properties of the mutated enzymes were examined in this study. The mutated enzymes of CmIDH-II substituted its Gln671, Leu724 and Phe735 residues with the corresponding residues of CpIDH-M (termed Q671K, L724Q and F735L, respectively) showed lower specific activity and thermostability for activity than the wild-type enzyme. Furthermore, the decreased specific activity was also observed in L693F. In contrast, the corresponding mutants of CpIDH-M, F693L, Q724L and L735F, showed the increased specific activity and thermostability for activity. The catalytic efficiency (k(cat)/K(m)) values of these mutated CmIDH-II and CpIDH-M were lower and higher than those of their wild-type IDHs, respectively. These results suggest that the Gln671, Leu693, Leu724 and Phe735 residues of CmIDH-II are important for exerting its high catalytic ability.

摘要

来自嗜冷细菌 Colwellia maris 和 Colwellia psychrerythraea 的单体异柠檬酸脱氢酶(分别为 CmIDH-II 和 CpIDH-M)是冷适应酶,彼此具有高度的氨基酸序列同一性(77%)。然而,CpIDH-M 的最大活性在最适温度下远低于 CmIDH-II。在这些酶的 C 末端区域 3 中,先前的研究表明该区域负责它们独特的催化能力,存在几个氨基酸残基的序列差异。其中,通过定点突变在这两个酶之间交换了 10 个氨基酸残基,并在本研究中检查了突变酶的几种性质。用 CpIDH-M 的相应残基取代 CmIDH-II 的 Gln671、Leu724 和 Phe735 残基的突变酶(分别命名为 Q671K、L724Q 和 F735L)的比活和热稳定性均低于野生型酶。此外,在 L693F 中也观察到比活降低。相比之下,CpIDH-M 的相应突变体 F693L、Q724L 和 L735F 表现出更高的比活和热稳定性。这些突变的 CmIDH-II 和 CpIDH-M 的催化效率(kcat/Km)值分别低于和高于其野生型 IDHs。这些结果表明,CmIDH-II 的 Gln671、Leu693、Leu724 和 Phe735 残基对发挥其高催化能力很重要。

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