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嗜冷和耐冷细菌异柠檬酸脱氢酶三个不同区域对其热性质的贡献

Contribution of Three Different Regions of Isocitrate Dehydrogenases from Psychrophilic and Psychrotolerant Bacteria to Their Thermal Properties.

作者信息

Mouri Yuka, Takada Yasuhiro

机构信息

Biosystems Science Course, Graduate School of Life Science, Hokkaido University, Kita 10-jo Nishi 8-chome, Kita-ku, Sapporo, 060-0810, Japan.

Depertment of Biological Sciences, Faculty of Science, Hokkaido University, Kita 10-jo Nishi 8-chome, Kita-ku, Sapporo, 060-0810, Japan.

出版信息

Curr Microbiol. 2018 Nov;75(11):1523-1529. doi: 10.1007/s00284-018-1554-5. Epub 2018 Aug 20.

Abstract

Monomeric isocitrate dehydrogenases of a psychrophilic bacterium, Colwellia maris, and a psychrotolerant bacterium, Pseudomonas psychrophila, (CmIDH and PpIDH) are cold-adapted and mesophilic, respectively. On the other hand, previous studies revealed that the monomeric IDH of Azotobacter vinelandii (AvIDH) is also mesophilic and the regions 2 and 3 among three regions of this enzyme are involved in the thermal properties. Therefore, to examine whether the region(s) responsible for the mesophilic properties are common between PpIDH and AvIDH, the genes of chimeric IDHs exchanging three regions of PpIDH and CmIDH in various combinations were constructed and overexpressed as His-tagged recombinant proteins in the Escherichia coli cells, and the chimeric and wild-type PpIDH and CmIDH were purified with Ni-chelating affinity column chromatography. The swapping chimeras of the regions 2 or 3 in PpIDH and CmIDH showed lower and higher optimum temperatures for activities and their thermostabilities than the wild-type ones, respectively. On the other hand, the exchange of the respective region 1 hardly influenced these properties of the two IDHs. Therefore, the regions 2 and 3 of the two IDHs were confirmed to be involved in their thermal properties. These results were coincident with those of the previous study on chimeric IDHs between AvIDH and CmIDH, indicating that the common regions of AvIDH and PpIDH are responsible for their mesophilic properties and the amino acid residues involved in their thermal properties are present in the regions 2 and 3.

摘要

嗜冷细菌海氏考氏菌(Colwellia maris)和耐冷细菌嗜冷假单胞菌(Pseudomonas psychrophila)的单体异柠檬酸脱氢酶(CmIDH和PpIDH)分别是冷适应型和嗜温型。另一方面,先前的研究表明,棕色固氮菌(Azotobacter vinelandii)的单体异柠檬酸脱氢酶(AvIDH)也是嗜温型,且该酶三个区域中的区域2和区域3与热性质有关。因此,为了研究PpIDH和AvIDH之间负责嗜温性质的区域是否相同,构建了以各种组合交换PpIDH和CmIDH三个区域的嵌合异柠檬酸脱氢酶基因,并作为带有His标签的重组蛋白在大肠杆菌细胞中过表达,然后用镍螯合亲和柱色谱法纯化嵌合型和野生型PpIDH及CmIDH。PpIDH和CmIDH中区域2或区域3的交换嵌合体分别显示出比野生型更低和更高的活性最适温度及其热稳定性。另一方面,区域1的交换对这两种异柠檬酸脱氢酶的这些性质几乎没有影响。因此,证实这两种异柠檬酸脱氢酶的区域2和区域3与它们的热性质有关。这些结果与先前关于AvIDH和CmIDH之间嵌合异柠檬酸脱氢酶的研究结果一致,表明AvIDH和PpIDH的共同区域负责它们的嗜温性质,并且参与其热性质的氨基酸残基存在于区域2和区域3中。

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