School of Bioengineering, Xihua University, Chengdu, 610039, People's Republic of China,
Antonie Van Leeuwenhoek. 2013 Nov;104(5):787-92. doi: 10.1007/s10482-013-9988-z. Epub 2013 Aug 4.
A novel halophilic, filamentous actinomycete, designated TRM 4064(T), was isolated from a hypersaline habitat in Sichuan Province, China. Phylogenetic analysis based on an almost-complete 16S rRNA gene sequence of strain TRM 4064(T) showed that it was most closely related to Actinopolyspora mortivallis (99.1 % sequence similarity). The sequence similarities between strain TRM 4064(T) and other Actinopolyspora species with validly-published names were <97.0 %. However, it had relatively low mean values for DNA-DNA relatedness with the A. mortivallis DSM 44261(T) (23.2 %). Optimal growth occurred at 37 °C, pH 7.0 and in the presence of 13 % (w/v) NaCl. The whole-cell sugar pattern consists of xylose, glucose, ribose and arabinose. The predominant menaquinones are MK-10(H4) (38.2 %), MK-9(H4) (25.1 %), MK-9(H2) (28.6 %) and MK-8(H4) (7.3 %). The major fatty acids are anteiso-C17:0 (36.9 %) and iso-C17:0 (19.3 %). The diagnostic phospholipids detected were diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylcholine (PC), phosphatidylinositol (PI) and two unknown phospholipids. The G+C content of the genomic DNA of the type strain is 66.3 mol%. Strain TRM 4064(T) therefore represents a novel species of the genus Actinopolyspora, for which the name Actinopolyspora dayingensis sp. nov. is proposed. The type strain is TRM 4064(T) (= KCTC 19979(T) = CCTCC AA 2010010(T)).
一株新的嗜盐、丝状放线菌,命名为 TRM 4064(T),从中国四川省的一个高盐栖息地中分离出来。基于菌株 TRM 4064(T)的近乎完整的 16S rRNA 基因序列的系统发育分析表明,它与游动放线菌(Actinopolyspora mortivallis)最为密切相关(99.1%的序列相似度)。与具有有效发表名称的其他游动放线菌属种相比,菌株 TRM 4064(T)的序列相似度<97.0%。然而,它与 A. mortivallis DSM 44261(T)的 DNA-DNA 相关度的平均值相对较低(23.2%)。最佳生长条件为 37°C、pH 值 7.0 和 13%(w/v)NaCl。全细胞糖模式由木糖、葡萄糖、核糖和阿拉伯糖组成。主要的类异戊二烯醌是 MK-10(H4)(38.2%)、MK-9(H4)(25.1%)、MK-9(H2)(28.6%)和 MK-8(H4)(7.3%)。主要脂肪酸是anteiso-C17:0(36.9%)和 iso-C17:0(19.3%)。检测到的诊断磷脂有双磷脂酰甘油(DPG)、磷脂酰甘油(PG)、磷脂酰胆碱(PC)、磷脂酰肌醇(PI)和两种未知磷脂。模式菌株的基因组 DNA 的 G+C 含量为 66.3mol%。因此,菌株 TRM 4064(T)代表游动放线菌属的一个新种,建议将其命名为大邑游动放线菌(Actinopolyspora dayingensis)sp. nov.。模式菌株为 TRM 4064(T)=KCTC 19979(T)=CCTCC AA 2010010(T)。