• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

删除和基因表达分析定义了在 Penicillium paxilli 中 paxilline 的生物合成基因簇。

Deletion and gene expression analyses define the paxilline biosynthetic gene cluster in Penicillium paxilli.

机构信息

Institute of Fundamental Sciences, Massey University, Private Bag 11222, Palmerston North 4442, New Zealand.

出版信息

Toxins (Basel). 2013 Aug 14;5(8):1422-46. doi: 10.3390/toxins5081422.

DOI:10.3390/toxins5081422
PMID:23949005
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3760044/
Abstract

The indole-diterpene paxilline is an abundant secondary metabolite synthesized by Penicillium paxilli. In total, 21 genes have been identified at the PAX locus of which six have been previously confirmed to have a functional role in paxilline biosynthesis. A combination of bioinformatics, gene expression and targeted gene replacement analyses were used to define the boundaries of the PAX gene cluster. Targeted gene replacement identified seven genes, paxG, paxA, paxM, paxB, paxC, paxP and paxQ that were all required for paxilline production, with one additional gene, paxD, required for regular prenylation of the indole ring post paxilline synthesis. The two putative transcription factors, PP104 and PP105, were not co-regulated with the pax genes and based on targeted gene replacement, including the double knockout, did not have a role in paxilline production. The relationship of indole dimethylallyl transferases involved in prenylation of indole-diterpenes such as paxilline or lolitrem B, can be found as two disparate clades, not supported by prenylation type (e.g., regular or reverse). This paper provides insight into the P. paxilli indole-diterpene locus and reviews the recent advances identified in paxilline biosynthesis.

摘要

吲哚二萜类化合物派烯是由青霉属(Penicillium)合成的一种丰富的次生代谢产物。在 PAX 基因座共鉴定出 21 个基因,其中 6 个先前已被证实具有在派烯生物合成中发挥功能作用。通过生物信息学、基因表达和靶向基因替换分析相结合,确定了 PAX 基因簇的边界。靶向基因替换鉴定出了 7 个基因,即 paxG、paxA、paxM、paxB、paxC、paxP 和 paxQ,它们都对派烯的产生是必需的,另外还有一个基因 paxD,对派烯合成后吲哚环的常规 prenylation 是必需的。两个假定的转录因子 PP104 和 PP105 与 pax 基因没有共同调节,并且基于靶向基因替换,包括双敲除,在派烯产生中没有作用。涉及吲哚二萜类化合物 prenylation 的吲哚二甲基烯丙基转移酶的关系,如派烯或洛替雷姆 B,可以发现有两个不同的分支,这与 prenylation 类型(例如,常规或反向)无关。本文提供了对青霉属吲哚二萜类化合物基因座的深入了解,并回顾了最近在派烯生物合成中确定的进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/db6cd5aeba17/toxins-05-01422-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/73475a470b7f/toxins-05-01422-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/9126a6789409/toxins-05-01422-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/ee72e3966926/toxins-05-01422-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/b15d9b644154/toxins-05-01422-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/5a5866eb6dca/toxins-05-01422-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/017c594d11a1/toxins-05-01422-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/cbd36604216d/toxins-05-01422-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/5e642234571c/toxins-05-01422-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/d61fd025780a/toxins-05-01422-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/db6cd5aeba17/toxins-05-01422-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/73475a470b7f/toxins-05-01422-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/9126a6789409/toxins-05-01422-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/ee72e3966926/toxins-05-01422-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/b15d9b644154/toxins-05-01422-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/5a5866eb6dca/toxins-05-01422-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/017c594d11a1/toxins-05-01422-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/cbd36604216d/toxins-05-01422-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/5e642234571c/toxins-05-01422-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/d61fd025780a/toxins-05-01422-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d311/3760044/db6cd5aeba17/toxins-05-01422-g010.jpg

相似文献

1
Deletion and gene expression analyses define the paxilline biosynthetic gene cluster in Penicillium paxilli.删除和基因表达分析定义了在 Penicillium paxilli 中 paxilline 的生物合成基因簇。
Toxins (Basel). 2013 Aug 14;5(8):1422-46. doi: 10.3390/toxins5081422.
2
Molecular cloning and genetic analysis of an indole-diterpene gene cluster from Penicillium paxilli.来自佩氏青霉的吲哚二萜基因簇的分子克隆与遗传分析。
Mol Microbiol. 2001 Feb;39(3):754-64. doi: 10.1046/j.1365-2958.2001.02265.x.
3
Four gene products are required for the fungal synthesis of the indole-diterpene, paspaline.真菌合成吲哚二萜类化合物巴斯帕灵需要四种基因产物。
FEBS Lett. 2006 Mar 6;580(6):1625-30. doi: 10.1016/j.febslet.2006.02.008. Epub 2006 Feb 17.
4
Functional analysis of a prenyltransferase gene (paxD) in the paxilline biosynthetic gene cluster.在派利灵生物合成基因簇中对一个法尼基转移酶基因(paxD)的功能分析。
Appl Microbiol Biotechnol. 2014 Jan;98(1):199-206. doi: 10.1007/s00253-013-4834-9. Epub 2013 Mar 24.
5
Defining paxilline biosynthesis in Penicillium paxilli: functional characterization of two cytochrome P450 monooxygenases.确定盘菌青霉素中盘菌青霉素生物合成:两种细胞色素P450单加氧酶的功能表征
J Biol Chem. 2007 Jun 8;282(23):16829-37. doi: 10.1074/jbc.M701626200. Epub 2007 Apr 11.
6
Molecular Cloning and Functional Analysis of Gene Clusters for the Biosynthesis of Indole-Diterpenes in Penicillium crustosum and P. janthinellum.地壳青霉和淡紫青霉中吲哚二萜生物合成基因簇的分子克隆与功能分析
Toxins (Basel). 2015 Jul 23;7(8):2701-22. doi: 10.3390/toxins7082701.
7
Molecular analysis of two cytochrome P450 monooxygenase genes required for paxilline biosynthesis in Penicillium paxilli, and effects of paxilline intermediates on mammalian maxi-K ion channels.青霉中产孢青霉素生物合成所需的两个细胞色素P450单加氧酶基因的分子分析,以及产孢青霉素中间体对哺乳动物大电导钙激活钾离子通道的影响。
Mol Genet Genomics. 2003 Oct;270(1):9-23. doi: 10.1007/s00438-003-0887-2. Epub 2003 Jul 18.
8
A fungal prenyltransferase catalyzes the regular di-prenylation at positions 20 and 21 of paxilline.一种真菌异戊二烯基转移酶催化了鬼笔环肽20位和21位的常规双异戊二烯化反应。
Biosci Biotechnol Biochem. 2014;78(3):448-54. doi: 10.1080/09168451.2014.882759. Epub 2014 May 22.
9
Identification of two aflatrem biosynthesis gene loci in Aspergillus flavus and metabolic engineering of Penicillium paxilli to elucidate their function.鉴定黄曲霉中两个黄曲霉毒素生物合成基因座,并对扩展青霉进行代谢工程改造以阐明其功能。
Appl Environ Microbiol. 2009 Dec;75(23):7469-81. doi: 10.1128/AEM.02146-08. Epub 2009 Oct 2.
10
Indole-diterpene gene cluster from Aspergillus flavus.来自黄曲霉的吲哚二萜基因簇。
Appl Environ Microbiol. 2004 Nov;70(11):6875-83. doi: 10.1128/AEM.70.11.6875-6883.2004.

引用本文的文献

1
An overlooked cyclase plays a central role in the biosynthesis of indole diterpenes.一种被忽视的环化酶在吲哚二萜生物合成中起核心作用。
Chem Sci. 2025 Apr 25;16(21):9441-9446. doi: 10.1039/d5sc02009c. eCollection 2025 May 28.
2
Dissection of the epoxyjanthitrem pathway in sp. TG-3 strain AR37 by CRISPR gene editing.通过CRISPR基因编辑解析sp. TG-3菌株AR37中的环氧简丝震颤素途径。
Front Fungal Biol. 2022 Aug 10;3:944234. doi: 10.3389/ffunb.2022.944234. eCollection 2022.
3
Generation of Alternate Indole Diterpene Architectures in Two Species of .

本文引用的文献

1
Functional analysis of a prenyltransferase gene (paxD) in the paxilline biosynthetic gene cluster.在派利灵生物合成基因簇中对一个法尼基转移酶基因(paxD)的功能分析。
Appl Microbiol Biotechnol. 2014 Jan;98(1):199-206. doi: 10.1007/s00253-013-4834-9. Epub 2013 Mar 24.
2
Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the clavicipitaceae reveals dynamics of alkaloid loci.植物共生真菌作为化学工程师:棒束孢科的多基因组分析揭示了生物碱基因座的动态。
PLoS Genet. 2013;9(2):e1003323. doi: 10.1371/journal.pgen.1003323. Epub 2013 Feb 28.
3
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.
两种 中交替吲哚二萜骨架的生成。
J Am Chem Soc. 2023 Feb 8;145(5):2754-2758. doi: 10.1021/jacs.2c11170. Epub 2023 Jan 29.
4
Noonindoles A-F: Rare Indole Diterpene Amino Acid Conjugates from a Marine-Derived Fungus, CMB-M0339.正午吲哚 A-F:一种罕见的海洋来源真菌 CMB-M0339 产生的吲哚二萜氨基酸化合物。
Mar Drugs. 2022 Nov 7;20(11):698. doi: 10.3390/md20110698.
5
The Biosynthesis Related Enzyme, Structure Diversity and Bioactivity Abundance of Indole-Diterpenes: A Review.吲哚二萜类的生物合成相关酶、结构多样性和生物活性丰度:综述。
Molecules. 2022 Oct 13;27(20):6870. doi: 10.3390/molecules27206870.
6
Genomic and Chemical Profiling of B9, a Unique Fungus Derived from Sponge.对源自海绵的独特真菌B9的基因组和化学分析
J Fungi (Basel). 2022 Jun 29;8(7):686. doi: 10.3390/jof8070686.
7
Subcellular localization of fungal specialized metabolites.真菌特殊代谢产物的亚细胞定位
Fungal Biol Biotechnol. 2022 May 25;9(1):11. doi: 10.1186/s40694-022-00140-z.
8
FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution.功能订单:一种通过计算分子共进化来鉴定必需生物合成基因的强大且半自动的方法。
PLoS Comput Biol. 2021 Sep 27;17(9):e1009372. doi: 10.1371/journal.pcbi.1009372. eCollection 2021 Sep.
9
Analysis of the Indole Diterpene Gene Cluster for Biosynthesis of the Epoxy-Janthitrems in Endophytes.内生菌中环氧詹氏曲菌素生物合成的吲哚二萜基因簇分析
Microorganisms. 2019 Nov 13;7(11):560. doi: 10.3390/microorganisms7110560.
10
Nodulisporic acid E biosynthesis: characterisation of NodD1, an indole-diterpene prenyltransferase that acts on an emindole SB derived indole-diterpene scaffold.节孢酸E的生物合成:NodD1的特性,一种作用于来源于埃默吲哚SB的吲哚-二萜骨架的吲哚-二萜异戊烯基转移酶。
Medchemcomm. 2019 May 27;10(7):1160-1164. doi: 10.1039/c9md00143c. eCollection 2019 Jul 1.
MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
4
Reconstitution of biosynthetic machinery for indole-diterpene paxilline in Aspergillus oryzae.在米曲霉中重建吲哚二萜化合物培西他滨的生物合成机制。
J Am Chem Soc. 2013 Jan 30;135(4):1260-3. doi: 10.1021/ja3116636. Epub 2013 Jan 15.
5
Structural and mechanistic studies of HpxO, a novel flavin adenine dinucleotide-dependent urate oxidase from Klebsiella pneumoniae.结构与机制研究 HpxO,一种新型黄素腺嘌呤二核苷酸依赖尿酸氧化酶来自肺炎克雷伯菌。
Biochemistry. 2013 Jan 22;52(3):477-87. doi: 10.1021/bi301262p. Epub 2013 Jan 9.
6
Functional analysis of an indole-diterpene gene cluster for lolitrem B biosynthesis in the grass endosymbiont Epichloë festucae.功能分析在草内生真菌禾顶囊壳中合成麦角灵 B 的吲哚二萜基因簇。
FEBS Lett. 2012 Jul 30;586(16):2563-9. doi: 10.1016/j.febslet.2012.06.035. Epub 2012 Jun 29.
7
Protein annotation and modelling servers at University College London.伦敦大学学院的蛋白质注释和建模服务器。
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W563-8. doi: 10.1093/nar/gkq427. Epub 2010 May 27.
8
Characterization of cyclo-acetoacetyl-L-tryptophan dimethylallyltransferase in cyclopiazonic acid biosynthesis: substrate promiscuity and site directed mutagenesis studies.环匹阿尼酸生物合成中环乙酰乙酰-L-色氨酸二甲基烯丙基转移酶的特性:底物选择性和定点诱变研究
Biochemistry. 2009 Nov 24;48(46):11032-44. doi: 10.1021/bi901597j.
9
Phylogenetic analyses reveal monophyletic origin of the ergot alkaloid gene dmaW in fungi.系统发育分析揭示真菌中麦角生物碱基因 dmaW 的单系起源。
Evol Bioinform Online. 2009 Jun 4;5:15-30. doi: 10.4137/ebo.s2633.
10
Identification of two aflatrem biosynthesis gene loci in Aspergillus flavus and metabolic engineering of Penicillium paxilli to elucidate their function.鉴定黄曲霉中两个黄曲霉毒素生物合成基因座,并对扩展青霉进行代谢工程改造以阐明其功能。
Appl Environ Microbiol. 2009 Dec;75(23):7469-81. doi: 10.1128/AEM.02146-08. Epub 2009 Oct 2.