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典型细菌信号转导回路的结构使得单个点突变赋予新的网络特性。

The architecture of a prototypical bacterial signaling circuit enables a single point mutation to confer novel network properties.

机构信息

Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.

出版信息

PLoS Genet. 2013;9(8):e1003706. doi: 10.1371/journal.pgen.1003706. Epub 2013 Aug 22.

DOI:10.1371/journal.pgen.1003706
PMID:23990799
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3750022/
Abstract

Even a single mutation can cause a marked change in a protein's properties. When the mutant protein functions within a network, complex phenotypes may emerge that are not intrinsic properties of the protein itself. Network architectures that enable such dramatic changes in function from a few mutations remain relatively uncharacterized. We describe a remarkable example of this versatility in the well-studied PhoQ/PhoP bacterial signaling network, which has an architecture found in many two-component systems. We found that a single point mutation that abolishes the phosphatase activity of the sensor kinase PhoQ results in a striking change in phenotype. The mutant responds to stimulus in a bistable manner, as opposed to the wild-type, which has a graded response. Mutant cells in on and off states have different morphologies, and their state is inherited over many generations. Interestingly, external conditions that repress signaling in the wild-type drive the mutant to the on state. Mathematical modeling and experiments suggest that the bistability depends on positive autoregulation of the two key proteins in the circuit, PhoP and PhoQ. The qualitatively different characteristics of the mutant come at a substantial fitness cost. Relative to the off state, the on state has a lower fitness in stationary phase cultures in rich medium (LB). However, due to the high inheritance of the on state, a population of on cells can be epigenetically trapped in a low-fitness state. Our results demonstrate the remarkable versatility of the prototypical two-component signaling architecture and highlight the tradeoffs in the particular case of the PhoQ/PhoP system.

摘要

即使单个突变也能导致蛋白质性质的显著改变。当突变蛋白在网络中发挥功能时,可能会出现复杂的表型,而这些表型不是蛋白质本身固有的特性。允许从少数突变中产生如此剧烈的功能变化的网络结构仍然相对没有得到充分的描述。我们在研究得很好的 PhoQ/PhoP 细菌信号网络中描述了这种多功能性的一个显著例子,该网络具有许多双组分系统中存在的架构。我们发现,一个消除传感器激酶 PhoQ 磷酸酶活性的单点突变导致表型发生显著变化。突变体以双稳态的方式对刺激做出反应,而野生型则以渐变的方式做出反应。处于开和关状态的突变细胞具有不同的形态,并且它们的状态可以遗传多代。有趣的是,在野生型中抑制信号的外部条件会使突变体进入开状态。数学建模和实验表明,双稳态依赖于回路中两个关键蛋白 PhoP 和 PhoQ 的正自调节。突变体的定性不同特征带来了实质性的适应成本。与关闭状态相比,在富含营养的 LB 培养基中静止期培养物的开启状态的适应性较低。然而,由于开启状态的高遗传性,一群开启细胞可以在低适应性状态下被表观遗传困住。我们的结果表明了原型双组分信号架构的显著多功能性,并突出了 PhoQ/PhoP 系统特定情况下的权衡。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/7abf521bba12/pgen.1003706.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/d3e71ae9dbb1/pgen.1003706.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/408a85cbd210/pgen.1003706.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/96e5bfb1dce1/pgen.1003706.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/19a025e6d0fb/pgen.1003706.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/c45ff110fe5b/pgen.1003706.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/7abf521bba12/pgen.1003706.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/d3e71ae9dbb1/pgen.1003706.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/408a85cbd210/pgen.1003706.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/96e5bfb1dce1/pgen.1003706.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/19a025e6d0fb/pgen.1003706.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/c45ff110fe5b/pgen.1003706.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d77c/3750022/7abf521bba12/pgen.1003706.g006.jpg

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6
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