Dahal Ram Hari, Chaudhary Dhiraj Kumar, Kim Jaisoo
Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Gyeonggi-Do 16227, Republic of Korea.
Int J Syst Evol Microbiol. 2018 Jun;68(6):1955-1962. doi: 10.1099/ijsem.0.002772. Epub 2018 Apr 23.
A novel bacterium, designated strain E9, was isolated from pine forest soil of Kyonggi University (Suwon, Republic of Korea). Cells were facultatively anaerobic, Gram-staining-negative, catalase-negative, oxidase-positive, non-motile, non-spore-forming, rod-shaped and straw coloured. Prosthecae were absent. Glucose was fermented. The strain grew in the pH range of 5.0-10.0 (optimum, 6.5-8.5) and at 45 °C (optimum, 28-32 °C). E9 was sensitive to NaCl at low concentration and tolerated only 0.2 % NaCl (w/v). A phylogenetic analysis based on 16S rRNA gene sequences revealed that E9 formed a lineage within the phylum Proteobacteria that was distinct from various members of the order Rhizobiales, including Ancalomicrobium adetum DSM 4722 (94.76 % sequence similarity), 'Nitratireductor lucknowense' IITR-21 (92.72 %), Prosthecomicrobium hirschii 16 (92.66 %) and Kaistia soli DSM 19436 (92.53 %). The predominant isoprenoid quinone was Q-10. The major polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and phosphatidyl-N-methylethanolamine. Major cellular fatty acids were summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c), summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), and C16 : 0. The DNA G+C content of the type strain was 68.4 mol%. Polyphasic characterization indicated that strain E9 represented a novel species in a novel genus within a novel family, for which the name Pinisolibacter ravus gen. nov., sp. nov. is proposed. The type strain of Pinisolibacter ravus is E9 (=KEMB 9005-534=KACC 19120=NBRC 112686). A formal allocation of the genus Ancalomicrobium to the family Ancalomicrobiaceae fam. nov. is also proposed.
从韩国京畿大学(水原市)的松林土壤中分离出一种新型细菌,命名为E9菌株。细胞为兼性厌氧,革兰氏染色阴性,过氧化氢酶阴性,氧化酶阳性,无运动性,不形成芽孢,杆状,呈稻草色。无柄杆菌。可发酵葡萄糖。该菌株在pH值5.0 - 10.0范围内生长(最适pH值6.5 - 8.5),在45 °C下生长(最适温度28 - 32 °C)。E9对低浓度NaCl敏感,仅耐受0.2 %(w/v)的NaCl。基于16S rRNA基因序列的系统发育分析表明,E9在变形菌门内形成了一个谱系,与根瘤菌目不同成员不同,包括阿氏无柄微菌DSM 4722(序列相似性94.76 %)、“勒克瑙硝酸盐还原菌”IITR - 21(92.72 %)、赫氏柄杆菌16(92.66 %)和土壤凯氏杆菌DSM 19436(92.53 %)。主要类异戊二烯醌为Q - 10。主要极性脂为双磷脂酰甘油、磷脂酰胆碱、磷脂酰乙醇胺、磷脂酰甘油和磷脂酰 - N - 甲基乙醇胺。主要细胞脂肪酸为总和特征8(C18 : 1ω7c和/或C18 : 1ω6c)、总和特征3(C16 : 1ω7c和/或C16 : 1ω6c)以及C16 : 0。模式菌株的DNA G + C含量为68.4 mol%。多相表征表明,E9菌株代表了一个新科内一个新属中的一个新物种,为此提出新属名锈色松栖菌属(Pinisolibacter),新种名锈色松栖菌(Pinisolibacter ravus)。锈色松栖菌的模式菌株为E9(=KEMB 9005 - 534 = KACC 19120 = NBRC 112686)。还提议将无柄微菌属正式归入新科无柄微菌科(Ancalomicrobiaceae)。